Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq5 192 8e-44
seq6 183 4e-41
seq2 141 1e-28
>seq5
Length=2743614
Score = 192 bits (212), Expect = 8e-44
Identities = 616/946 (65%), Gaps = 16/946 (2%)
Strand=Plus/Minus
Query 69268 AGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATC 69327
|| || ||||| || ||||||||||| || || || | || | | ||||| || |||
Sbjct 1439867 AGAGCCACAGAAGCCAGATTACAAACAGCAACTTCTTCAGGAGACGAGTATTGAATAATC 1439808
Query 69328 TCTGTACATAGATTACTAC-ATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTT 69386
|| ||||| | ||| | || ||||||| || || ||||| ||||| || || |||
Sbjct 1439807 TCAGTACACAAATT-CGACGATTTGATCGTACCGAGATTCTGCTGGTTGGATTTCGCGTT 1439749
Query 69387 ACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGA 69446
|||| ||| || || || || |||||| || ||||| || ||| || ||| |
Sbjct 1439748 ACAGCTGTCTTTATACAGCATGAACGGACCTCCTGTTTCGATTTGACTCGTGAGAATCGC 1439689
Query 69447 TTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGT 69506
|| | | || ||| || ||| | ||||| || || || ||||| | |
Sbjct 1439688 CTTGAACAGCTCCTGAGCGTTGATTTGAGAATTGTACAGCCCCTTCTTCTCATACTCATT 1439629
Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566
|| | || ||||| || |||||||| |||||| ||| ||| ||| | | || ||
Sbjct 1439628 GTACAACCTCTCGAAATCGTCTCCCCAGACATCAGCCAGTCCTGGAGCTCTTCTGGGGCA 1439569
Query 69567 CATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAG 69626
| | ||||| || | | | ||| ||||||||| | ||| || | ||| ||
Sbjct 1439568 GAAAAGCGACCATTTTTCGCCGTTTTCGACTTTTTTCATAAACAAATCAGGCACCCAGAG 1439509
Query 69627 AGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGA 69685
||| ||| || || || | | ||| ||||| || || ||||||| | || |
Sbjct 1439508 AGC-ATAGAACAGGTCACGTGCTCTGTTTTCCTCTGCGCCATGATTTTTTCGCAAATTCA 1439450
Query 69686 GAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTT 69745
|||| |||| |||||| | |||||| || || | ||| | || | |||| |||||||
Sbjct 1439449 GAAAATCCAAAATATCCGCATGCCAAGGCTCCAAATACACTGCAAACGCTCCAGGTCGTT 1439390
Query 69746 TATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAA 69805
| ||||| || ||||| | ||| | || || || || | ||||| ||||| |||| |
Sbjct 1439389 TGTTTCCCCCTTGATCAACGTACCGTGCGGTATTGTTGAACACTCTGAGCATGGGAACGA 1439330
Query 69806 TACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAA 69865
|||| ||| || | | || | ||| | |||| | || | || || ||
Sbjct 1439329 TACCTGAAGACCGTCCTTGAGAACCTGTAATGAGAGCTCCTTTGGCTCTGATGTTGTGAA 1439270
Query 69866 TAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCAT 69925
|| |||||||| |||||||| |||| || || ||||||| ||| | ||||| |
Sbjct 1439269 TATGCAGACCTATACCTCCTGCTGTTTTGGAAATCTGAGCACACGTTTTGAGCGTGTCGT 1439210
Query 69926 ATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGAT 69985
| || || || ||| || || |||| || ||||||||| || | ||| |
Sbjct 1439209 AGATGCCGTCAATGGAGTCTGCTGCCATGGCAACGAGAAAACAGGACGAAAGCTGACCCT 1439150
Query 69986 GTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAG----AA 70041
| ||| || ||||| || || |||||||| || ||||||||| ||| | || ||
Sbjct 1439149 GAGGAGTACCTGCATTGAACAAGGTAGGAGAAGCATGAGTGAAC--TTTCTGAGAGATAA 1439092
Query 70042 AGCAGATTGTATGTTTCAATAGC--TGATTCTATATCCCACTGATGAATTCCTATCGCGA 70099
|||||| ||| ||||| | | || | ||| | | || || ||| | |
Sbjct 1439091 AGCAGA--GTACGTTTCGAGCACCTTGGTGGTATCGTCTCC--GTGGATGGCTAGTGATA 1439036
Query 70100 CACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATG 70159
| ||||| | ||| || ||||||| ||| || | | ||| |||| ||||| |
Sbjct 1439035 CTCGCATGAGCATCTGTTGAGGTCTTTCCACTACTCGTCCCTGGATTCTCAAAAGGTACG 1438976
Query 70160 ATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCT 70205
||||||||| || || || ||||| ||| ||| | | ||||||
Sbjct 1438975 ATTTTTCCAACGTCTTGAATCCAAAGTAGGAGTAAGTGAGGTCTCT 1438930
>seq6
Length=2655350
Score = 183 bits (202), Expect = 4e-41
Identities = 397/589 (67%), Gaps = 10/589 (2%)
Strand=Plus/Minus
Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676
||||| ||||| || || |||||||||| | ||| | ||||| || || || ||
Sbjct 574909 CAGGCAAAGTCGGTGTGCAGACCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGTCAGG 574850
Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736
|||||||| ||||| ||||| |||||||| || |||| ||||||||||| || |||||
Sbjct 574849 CCAGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAAGAAA 574790
Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCC----GTA-ACTTGTATCATTAT 39791
|| || || || || ||||| || | ||||| ||| || ||| ||| | || |
Sbjct 574789 ATACCCTCAACGGCAGCAAAGGCGATAAGTCGCTCGCCAAAGGTAGACTCG--TCGTCGG 574732
Query 39792 GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCAT 39851
|||||||| | ||||| || || |||||||| | || || || || || || || |
Sbjct 574731 AGATCCACTTGAGAGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGCGT 574672
Query 39852 TAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911
| || || ||| | || | || || | || ||||| || | |||| ||
Sbjct 574671 TGAACAGGTAAGTTCGCTCCTTGGGGTCCTTGATGTAAGTATCAATGAGCAGAGAGTAGG 574612
Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971
| || ||||||||||| || ||| ||||| |||||||| || || | || |||| |
Sbjct 574611 TCTCGGAATGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACTTGGCCTCAGGAG 574552
Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031
|| |||||| | | || | || ||| || || || || || || ||| || |
Sbjct 574551 CCTGAACCTCTCCAGAGAACCGCTCAACCAGGTTCTCGTTGACAATACCGTCAGAGGCAG 574492
Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG--GGTG-TCAATTTATTCC 40088
|||| || |||| || || ||| ||| | || || ||| | || | || | ||
Sbjct 574491 CAAAGAAAGCCAGCACGTGCGAAATGAAAAACTTCTCGTCGCTGTTGAGCCGGTTCTCCC 574432
Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148
|||| ||||| || | ||| | || || || ||||| || || ||||| ||||
Sbjct 574431 AGTCGCCCATATCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCT 574372
Query 40149 TTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197
| |||||||| | ||| || ||| | || || || || || | |||||
Sbjct 574371 TCTTGTACATCTGCCAAATCTCATGGTACTGAATAGGGAAGAGCACAAA 574323
>seq2
Length=4150472
Score = 141 bits (156), Expect = 1e-28
Identities = 454/698 (65%), Gaps = 10/698 (1%)
Strand=Plus/Minus
Query 69519 GAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCA 69578
||| || || || | || || || | || || || || || || ||||| | | |||
Sbjct 325174 GAACTCGTCACCGTAGACGTCGTCAAGACCGGGGCACTCGTTGGGGCACATGAGGGTCCA 325115
Query 69579 CACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAG 69638
| | | | | || ||||| | ||| || || ||||||||||| || || | || ||
Sbjct 325114 CTCGCCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGAATCCACAGGGCCAGGAACAG 325055
Query 69639 ATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAAT 69698
|||| || || | || || ||||| || ||| || ||| ||||| | ||
Sbjct 325054 GTCTCGGGCTCGGATCTCCTCCTTTCCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGAT 324995
Query 69699 ATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTG 69758
|| ||||| || || || || || || | | |||| ||||| || || || |||||
Sbjct 324994 GTCGTCGTGCCAAGGCTCAAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTACCACCCTG 324935
Query 69759 ATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTT 69818
|| | ||||| ||||||||| || ||||||| ||||| || | ||||| || || |
Sbjct 324934 GTCAACGTATCGGGCAGTGTTGTTGTAGACTCGGAGCATGGGCACGATACCGTTGGAGGT 324875
Query 69819 ACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTAT 69878
||| || || || | ||| || || | || ||||| || || || ||||| ||
Sbjct 324874 ACCGTTGGTGCCGGCAATGTAGGAGCCGGTGGCTCGAATGTTGTGGATGGAGAGACCGAT 324815
Query 69879 TCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTAT 69938
||||| || || ||||| |||||||| || | || || || || || || ||
Sbjct 324814 ACCTCCGGCAGACTTGGAGATGAGAGCACAGGTCTTGAGGGTATCGTAGATGCCGTCGAT 324755
Query 69939 GCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGC 69998
| || || ||||||| | || ||||| |||||| || | || ||||| ||
Sbjct 324754 GGAGTCGTCCTTCATGTTGACGAGGAAACACGAAGACATCTGGGGCTGGGGGGTTCCAGC 324695
Query 69999 ATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGA-AAGCAGATTGTATGTTT 70057
|| | | || || || ||||| ||||| | || | || | | || ||||| || |
Sbjct 324694 GTTGTAGAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATGTAG-TTGTAGGTCT 324636
Query 70058 CAATAGCTGATTCTAT-ATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGC 70116
|||| || | || | ||| | || || || | | ||| ||||| | ||| |||
Sbjct 324635 CAATGGCCCGGGCAATGTTGTCACCG-TGGATACCGACAGAGACTCGCATGATCATCTGC 324577
Query 70117 TGAGGTCGTT---CTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTT 70173
|| ||||| | | || | | || | | | |||||||| | ||||| ||
Sbjct 324576 TGGGGTCGCTCGGCAACAGCT---CCGTTGACTCGAAGCAGGTATGCTCGCTCCAGGGTC 324520
Query 70174 TTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTA 70211
|| || ||||| |||||||| | ||||||| |||||
Sbjct 324519 TTGAAGCCAAAGTAGTTGTAGGTGAAGTCTCGGTCGTA 324482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908636859160
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