Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq6 138 1e-27 >seq6 Length=2655350 Score = 138 bits (152), Expect = 1e-27 Identities = 395/596 (66%), Gaps = 20/596 (3%) Strand=Plus/Minus Query 129737 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 129796 || ||||||||||||||||| ||||| || ||| || |||||||| || ||||| Sbjct 575185 ACTCGCTTCTCGAAGAAGTTGGTCTTTCCAGCCAGAGAAATGTTCTCCATGAAGTCAAAG 575126 Query 129797 GGGTTCTTTGAGTTCCAAA--TTGCTGGCACTCCAATCTGTTTGAGGAGACGATCCGAGA 129854 ||||| | ||||| | | ||| || ||||| || ||||| || | | Sbjct 575125 GGGTTGGTGGAGTTGTAGACCTTG--GGGTTTCCAAGAGCAACAAGCAGACGGTCGGCCA 575068 Query 129855 CGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATGGGAGCG 129914 | |||||||||||| ||| || || ||||||||||| || ||| ||||| | Sbjct 575067 CAAACTCAATGTACTGTCGCATGAGCTTGGCGTTCATACCGAGCAGACCACAAGGGAGAG 575008 Query 129915 CGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTCT 129974 | || | |||| ||| ||||||| | ||||| || | || | | | | ||| Sbjct 575007 CATCAGTAAGGAACTCCTGCTCAATGCCAACAGCCTCGACAATGACGTCCTCGACAATCT 574948 Query 129975 CCGTGCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAAACTCCTGGTGGAGA 130033 | || |||| || | | | || |||||| |||||| || ||| ||| Sbjct 574947 TCTTGGAGGGTCGGTT-CTCGAGGTGAGAGAAGAGCAGACAGGCAAAGTCGGTGTGCAGA 574889 Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 ||||| || || || ||||| || || |||||| ||| || ||||||||||| |||||| Sbjct 574888 CCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGACCTCGCTTC 574829 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | ||||||||| | ||| || || |||||||| || ||||| || || || Sbjct 574828 TTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAAGAAAATACCCTCAACGGCAGCAAAG 574769 Query 130154 GCAAAGAGACGCTCAGCAAAGG-AG-CGGGACTTTGTATCAAACCACTTCATCGCCCACT 130211 || | || ||||| |||||| || | | | | | | | |||||| | ||||| | Sbjct 574768 GCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGTCGGA--GATCCACTTGAGAGCCCAGT 574711 Query 130212 GCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCAA-AG---AGTTCCTTCTT 130266 ||||| |||| ||| || || | ||||| || || || || || ||||| || | Sbjct 574710 CGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGCGTTGAACAGGTAAGTTCGCTCCT 574651 Query 130267 TTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322 | || || |||||||| |||| ||||| || || || ||| ||||| Sbjct 574650 T-----GGGGTCCTTGATGTAAGTATCAATGAGCAGAGAGTAGGTCTCGGAATGGA 574600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435053121640