Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq6 138 1e-27
>seq6
Length=2655350
Score = 138 bits (152), Expect = 1e-27
Identities = 395/596 (66%), Gaps = 20/596 (3%)
Strand=Plus/Minus
Query 129737 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 129796
|| ||||||||||||||||| ||||| || ||| || |||||||| || |||||
Sbjct 575185 ACTCGCTTCTCGAAGAAGTTGGTCTTTCCAGCCAGAGAAATGTTCTCCATGAAGTCAAAG 575126
Query 129797 GGGTTCTTTGAGTTCCAAA--TTGCTGGCACTCCAATCTGTTTGAGGAGACGATCCGAGA 129854
||||| | ||||| | | ||| || ||||| || ||||| || | |
Sbjct 575125 GGGTTGGTGGAGTTGTAGACCTTG--GGGTTTCCAAGAGCAACAAGCAGACGGTCGGCCA 575068
Query 129855 CGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATGGGAGCG 129914
| |||||||||||| ||| || || ||||||||||| || ||| ||||| |
Sbjct 575067 CAAACTCAATGTACTGTCGCATGAGCTTGGCGTTCATACCGAGCAGACCACAAGGGAGAG 575008
Query 129915 CGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTCT 129974
| || | |||| ||| ||||||| | ||||| || | || | | | | |||
Sbjct 575007 CATCAGTAAGGAACTCCTGCTCAATGCCAACAGCCTCGACAATGACGTCCTCGACAATCT 574948
Query 129975 CCGTGCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAAACTCCTGGTGGAGA 130033
| || |||| || | | | || |||||| |||||| || ||| |||
Sbjct 574947 TCTTGGAGGGTCGGTT-CTCGAGGTGAGAGAAGAGCAGACAGGCAAAGTCGGTGTGCAGA 574889
Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093
||||| || || || ||||| || || |||||| ||| || ||||||||||| ||||||
Sbjct 574888 CCCTCATCTCGAGAAATGAGCTCGTTGGAGAAGGTCAGGCCAGGCATGAGACCTCGCTTC 574829
Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153
|| | ||||||||| | ||| || || |||||||| || ||||| || || ||
Sbjct 574828 TTGAGCCAGAAAATGGAGGCAAAAGATCCGGAGAAGAAAATACCCTCAACGGCAGCAAAG 574769
Query 130154 GCAAAGAGACGCTCAGCAAAGG-AG-CGGGACTTTGTATCAAACCACTTCATCGCCCACT 130211
|| | || ||||| |||||| || | | | | | | | |||||| | ||||| |
Sbjct 574768 GCGATAAGTCGCTCGCCAAAGGTAGACTCGTCGTCGGA--GATCCACTTGAGAGCCCAGT 574711
Query 130212 GCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCAA-AG---AGTTCCTTCTT 130266
||||| |||| ||| || || | ||||| || || || || || ||||| || |
Sbjct 574710 CGGCCTTCTTCTTGATGCAGGGAATGGTCTCAATGGCGTTGAACAGGTAAGTTCGCTCCT 574651
Query 130267 TTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322
| || || |||||||| |||| ||||| || || || ||| |||||
Sbjct 574650 T-----GGGGTCCTTGATGTAAGTATCAATGAGCAGAGAGTAGGTCTCGGAATGGA 574600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435053121640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |