Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq2 331 1e-85
>seq2
Length=4150472
Score = 331 bits (366), Expect = 1e-85
Identities = 434/601 (72%), Gaps = 0/601 (0%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| ||| | | ||||||||||||||| || | || | | |||||| |||
Sbjct 324585 TCATGCGAGTCTCTGTCGGTATCCACGGTGACAACATTGCCCGGGCCATTGAGACCTACA 324644
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
||| ||| ||| |||||||| || ||||| | || || || | ||||||||| ||
Sbjct 324645 ACTACATGTCCCAGAAGTACTTCACCCACGCTTCCCCCACTCTCTACAACGCTGGAACCC 324704
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
|| || |||||||| || ||||| || |||||||| ||||| ||||||||||
Sbjct 324705 CCCAGCCCCAGATGTCTTCGTGTTTCCTCGTCAACATGAAGGACGACTCCATCGACGGCA 324764
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
||||||| || |||||| ||||| | ||||||||||| | || ||||||||| ||
Sbjct 324765 TCTACGATACCCTCAAGACCTGTGCTCTCATCTCCAAGTCTGCCGGAGGTATCGGTCTCT 324824
Query 53433 ACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492
| | ||| | || || | |||| | || || || ||||| | || | |
Sbjct 324825 CCATCCACAACATTCGAGCCACCGGCTCCTACATTGCCGGCACCAACGGTACCTCCAACG 324884
Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552
| |||||||| |||||||| |||| ||||||||| ||||| ||||| |||||||||||
Sbjct 324885 GTATCGTGCCCATGCTCCGAGTCTACAACAACACTGCCCGATACGTTGACCAGGGTGGTA 324944
Query 53553 GGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT 53612
||||| || | || ||||| ||||| ||||| ||||||| |||||| | ||||
Sbjct 324945 ACAAGCGACCCGGAGCCTTTGCCATGTACCTTGAGCCTTGGCACGACGACATCTTCGAGT 325004
Query 53613 TTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAG 53672
| ||||||||| ||| || || | || ||||| || ||| |||||||| |
Sbjct 325005 TCTGCGAGCTGCGAAAGAACCACGGAAAGGAGGAGATCCGAGCCCGAGACCTGTTCCTGG 325064
Query 53673 CTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGA 53732
| ||||||||||| ||||| |||||| | || ||| || ||| |||||| ||| |
Sbjct 325065 CCCTGTGGATTCCCGACCTGTTCATGGAGCGAGTCGAGCAGAACGGCGAGTGGACCCTCA 325124
Query 53733 TGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGT 53792
||||||| |||||||||||||| || | | ||||||||||| ||||| || || |||
Sbjct 325125 TGTGCCCCAACGAGTGCCCCGGTCTTGACGACGTCTACGGTGACGAGTTCAAGAAGCTGT 325184
Query 53793 A 53793
|
Sbjct 325185 A 325185
Score = 154 bits (170), Expect = 2e-32
Identities = 531/815 (65%), Gaps = 40/815 (5%)
Strand=Plus/Plus
Query 55136 CGGAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCC 55195
|| ||||| ||| |||||||| || |||||||| | | ||| ||||||
Sbjct 325505 CGAAACCTCAACGCCATCATCGACCGAAACTACTACCCCGTTCCCGAGGCCAAGAAGTCC 325564
Query 55196 AACCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATG 55255
||| | || ||||| |||||||| | ||||| ||||| |||| || | |||||||
Sbjct 325565 AACATGCGACACCGACCCATCGCTCTGGGTGTCCAGGGTCTGGCTGATACCTTCATGGCT 325624
Query 55256 CTCGGATTGCCCTTCGACTCGGAACCTGCTCGAGAAATTAACCAGG-ACATCTTC-AGTC 55313
|| | | ||||| || || || || | |||| | | || | |||||| || |
Sbjct 325625 CTGCGTCTCCCCTTTGAGTCCGACGAGGC-CAAGAAGCTCAACATCCAGATCTTCGAGAC 325683
Query 55314 GCATCTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCTAT-GAGCGAGGGGACCTAC 55372
||||||| | ||| |||||| || | |||| || ||| ||||| |||||
Sbjct 325684 -CATCTACCACGGAGCCGTCGAGGCCTCTATGGAGATGGCCATTGAG-GAGGGTGCCTAC 325741
Query 55373 GAGACGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGGGCAAG 55432
||||| |||| | || || || ||||||| || |||||||| ||| || | |
Sbjct 325742 GAGACCTTCCAGGGCTCTCCTGCCTCCAAGGGAGACCTGCAGTTCGAC--ATGTGGAACG 325799
Query 55433 TCTGACCCCAT------------GTTTGAC------AAGTTGAAGCATGACATTCACTTG 55474
| | ||||| || ||| |||| ||| || || |||
Sbjct 325800 TTTC-CCCCACCGAGCTCTGGGAGTGGGACGACCTCAAGTCCAAGGTTGTCAAGCAC--- 325855
Query 55475 TGGGGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATC 55534
|| || || ||||| ||||| || || || ||||| || || || || |||||||
Sbjct 325856 ---GGTCTGCGAAACTCTCTGCTGGTCGCTCCTATGCCCACTGCTTCTACCTCTCAGATT 325912
Query 55535 ATGGGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTA 55594
| ||| ||||||| |||||||| ||||| ||||||| ||| || || ||
Sbjct 325913 CTCGGCTTCAACGAGTGCTTCGAGCCTTACACCTCCAACATTTACTCTCGACGAGTTCTT 325972
Query 55595 GCAGGTGAGTTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAG 55654
|| |||||||| || ||||| || |||||||||| || ||
Sbjct 325973 GCCGGTGAGTTCCAGATTGTCAACCCCTGGCTTCTCAAGGACCTTGTTGAGGTCGGTCTC 326032
Query 55655 TGGAACCCGCAGATCAAGA-CGGATATTGT-GCGGAACGGGGGGTCCGTCCAGAATCTGG 55712
|||||| | || |||| | || ||||| || || | || ||||| ||||| |
Sbjct 326033 TGGAACGAGACTATGAAGAACCGA-ATTGTCGCCGA-CAACGGATCCGTGCAGAACATCC 326090
Query 55713 ---AGATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGA 55769
| || || | | |||||||| | ||| ||| |||||||||||| | ||||||
Sbjct 326091 CCAACATCCCCCAGGAGATCAAGGAGCTGTACAAGACCGTGTGGGAGATTTCCCAGAAGC 326150
Query 55770 GTCTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACA 55829
| | || || ||| || || || | | | ||| |||||||||||||| || ||||
Sbjct 326151 GAATCATCGAGATGGCCGCCGACCGATCTCCCTTCATTGACCAGTCCCAGTCCCTCAACA 326210
Query 55830 TCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGA 55889
| ||| || | || | ||| ||| | | || |||||||| ||||| |||||||
Sbjct 326211 TTCACATCAAGGAGCCCACCATGGGTAAGCTCACTTCCATGCACTTCTACGGCTGGAAGA 326270
Query 55890 AGGGACTCAAGACGGGTATGTACTATCTGCGGACC 55924
|||| |||||||| ||||||||||| ||||| |||
Sbjct 326271 AGGGTCTCAAGACCGGTATGTACTACCTGCGAACC 326305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215870036200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |