Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq7 179 3e-40
seq5 84.2 2e-11
>seq7
Length=1104867
Score = 179 bits (198), Expect = 3e-40
Identities = 411/612 (67%), Gaps = 24/612 (4%)
Strand=Plus/Minus
Query 29873 TTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCT 29932
||||| | ||||||| |||| ||| ||||| |||||||||| |||| | | ||||
Sbjct 845654 TTCAGAGCATCCACGTGATCCTTGTACACGTGCGCGTCTCCCATAGTGTGAATGAGCTCT 845595
Query 29933 CCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATG 29992
|| || || | || || || || ||||| ||||| | || ||| |||||
Sbjct 845594 CCACAGTCCAGATCCGTCACCTGGGCAATCATTCGTGTGAGCAAAGCGTACGACGCGATA 845535
Query 29993 TTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGA----- 30047
|| ||||| || ||||| |||| ||| | |||| |||||| || || || || |
Sbjct 845534 TTGAAGGGAACACCGAGTCCCAAGTCACATGACCGCTGGTACAGTTGGCATGACAACCGA 845475
Query 30048 ----GCTCTCCGTCGCT------CACGTAAAACTGACACATGGCGTGGCACGGAGGAAGA 30097
|||| ||| | |||||||||||| || | ||| || ||||| |||
Sbjct 845474 CCTCGCTCAGAGTCTTTGTACGACACGTAAAACTGGCAAAACATGTGACAAGGAGGCAGA 845415
Query 30098 GCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGG 30157
||||||| || ||| |||||||||||| | | ||||| || ||||||| |||
Sbjct 845414 GCCATGATTTTCAGGTCAGCGGGGTTCCAGGCTGAAAGAATGATTCGTCTGTCTTGAGGG 845355
Query 30158 TTG--TTCCTGA-TGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAG 30214
|| || | || || | ||| | |||| ||||||||||| ||| || | |||
Sbjct 845354 TTAGTTTTCAGAGTGTGAATCAC--CTGTTTG-AGCTGATCCACACCCTGACCGGTGTAA 845298
Query 30215 TCTGCCCTCATG-TCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGG 30273
|||| ||| ||| ||||||||||||| ||||| | ||| ||||| || || || ||
Sbjct 845297 TCTGTG-TCACAATCCTTGTACTCTGCTCCAAAATGACGCCATTGGAAGCCATAGACAGG 845239
Query 30274 TCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACC 30333
|||||| || || || | ||| | || || ||| |||| ||| || |||| ||
Sbjct 845238 TCCCAGATCACCTTCACGTCGGTGTCCCAATCCAGCCTTTTCCAGAAACTCCTTGGACCC 845179
Query 30334 GTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCT 30393
|| |||||||||| | | || || || | ||| || |||| ||||
Sbjct 845178 ATTTCCGTCCCAGATGTGGATATTTTTGTCGCTCAGTTTCTTGCCGTCTGTGCACCCAGA 845119
Query 30394 GACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAG 30453
|| ||||| ||||| ||||||| ||| | | ||||||| ||||| || ||||| ||
Sbjct 845118 CACAAACCAGAGCAGTTCCTCCAAAACGCCTCTGTAAAAGACTCTCTTAGTGGTGAGTAG 845059
Query 30454 -GGGAAACTGTC 30464
|||| | ||||
Sbjct 845058 AGGGAGAATGTC 845047
>seq5
Length=2743614
Score = 84.2 bits (92), Expect = 2e-11
Identities = 134/186 (72%), Gaps = 10/186 (5%)
Strand=Plus/Plus
Query 52729 TCGTCAAGGTGAGGCTGAGGGCCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGT 52788
|||||||||| || || | || ||| | ||| |||| || ||||||||||| ||
Sbjct 360082 TCGTCAAGGTAAGAATGCGAACCACCAAGATCCCCCAGATTGGAGACAAGTTTGCATCTC 360141
Query 52789 -TCACGGCGCAAAAGGGGACGTGCGGAGC--CGTCCTGACCCAGGAGGACATGCC--CTT 52843
|||||| || ||||| || || | ||| ||| | ||||||||||| ||
Sbjct 360142 GTCACGGA-CAGAAGGGAACCATTGGTGTTACGTTTAGACAC--GAGGACATGCCGTTTT 360198
Query 52844 CGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGAT 52903
|| | || || ||||||||||| |||||||||||||||||||| |||| || | ||
Sbjct 360199 CGGC--CGAGGGAGTGGTGCCCGATATCATCATCAACCCCCACGCCATTCCTTCGCGTAT 360256
Query 52904 GACCGT 52909
||||||
Sbjct 360257 GACCGT 360262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406310305913748
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |