Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1 100 2e-16 >seq1 Length=4845111 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| |||| || ||||| || || | || Sbjct 2007636 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTTGAGGTCGAGTCTTCT 2007577 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||| ||||| || || || || || || || Sbjct 2007576 GACACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATCCCCCCGGACCAG 2007517 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| || || || | || ||| | || | || || |||||| Sbjct 2007516 CAGCGACTCATTTTCGCTGGAAAGCAGCTTGAGGACGGACGAACTCTGTCTGACTACAAC 2007457 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| ||| | ||| | || | || | || ||||| || Sbjct 2007456 ATCCAGAAGGAGTCCACCCTTCATCTTGTCCTCCGACTCCGAGGTGGTAT 2007407 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || |||||||| || ||| | || || || || || || | || Sbjct 2007180 ATGCAGATCTTTGTCAAGACTCTGACTGGAAAGACCATCACCCTCGAGGTTGAGTCTTCT 2007121 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||| ||||| || || || || || || || Sbjct 2007120 GACACCATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAG 2007061 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || || | || || | || | || ||||||||| Sbjct 2007060 CAGCGACTTATCTTCGCCGGTAAGCAGCTTGAGGATGGACGAACTCTGTCTGATTACAAC 2007001 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||| ||| | ||| | || | || | || ||||| Sbjct 2007000 ATCCAGAAGGAGTCCACCCTTCATCTCGTCCTCCGACTTCGAGGTGG 2006954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918296706880