Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1 93.3 3e-14
>seq1
Length=4845111
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || |||||||| ||||| || || || || || || || ||| |
Sbjct 2007408 ATGCAGATTTTCGTGAAGACCCTCACTGGAAAGACCATTACCCTTGAGGTCGAGTCCTCC 2007349
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| |||| ||| | || | || ||| ||||| || || | || || || ||
Sbjct 2007348 GACACCATTGACAATGTCAAGTC-CAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCA 2007290
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| | || || || || || || || ||||| | ||| ||| | ||| |||||
Sbjct 2007289 GCAGCGACTCATTTTCGCTGGTAAGCAGCTCGAAGATGGACGAACTCTGTCCGACTACAA 2007230
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 2007229 CATCCAGAAGGAGTCTAC 2007212
Score = 86.0 bits (94), Expect = 4e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || || || || || ||||| || ||||| ||||| ||||| || |
Sbjct 2007180 ATGCAGATCTTTGTCAAGACTCTGACTGGAAAGACCATCACCCTCGAGGTTGAGTCTTCT 2007121
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || || ||| ||||| || || | || || || ||
Sbjct 2007120 GACACCATTGACAACGTCAAGTCTAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAG 2007061
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || || ||||| || || || || || | ||| ||| | |||||||||
Sbjct 2007060 CAGCGACTTATCTTCGCCGGTAAGCAGCTTGAGGATGGACGAACTCTGTCTGATTACAAC 2007001
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 2007000 ATCCAGAAGGAGTCCAC 2006984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009521729652
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |