Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq7 192 4e-44
seq5 96.9 3e-15
>seq7
Length=1104867
Score = 192 bits (212), Expect = 4e-44
Identities = 416/612 (68%), Gaps = 24/612 (4%)
Strand=Plus/Minus
Query 27139 TTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCT 27198
||||| | |||||||||||| ||| ||||| |||||||||| ||||| | | ||||
Sbjct 845654 TTCAGAGCATCCACGTGATCCTTGTACACGTGCGCGTCTCCCATAGTGTGAATGAGCTCT 845595
Query 27199 CCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATG 27258
|| || || | || || || || ||||| ||||| | || ||| |||||
Sbjct 845594 CCACAGTCCAGATCCGTCACCTGGGCAATCATTCGTGTGAGCAAAGCGTACGACGCGATA 845535
Query 27259 TTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGA-----GA 27313
|| ||||| || ||||| |||| ||| | |||| |||||| || || || || ||
Sbjct 845534 TTGAAGGGAACACCGAGTCCCAAGTCACATGACCGCTGGTACAGTTGGCATGACAACCGA 845475
Query 27314 GCTCTC-CATCG-CTT--------ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGA 27363
||| | || | ||| ||||||||||| || | ||| || ||||| |||
Sbjct 845474 CCTCGCTCAGAGTCTTTGTACGACACGTAAAACTGGCAAAACATGTGACAAGGAGGCAGA 845415
Query 27364 GCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGG 27423
||||||| || ||| |||||||||||| | | ||||| || ||||||| |||
Sbjct 845414 GCCATGATTTTCAGGTCAGCGGGGTTCCAGGCTGAAAGAATGATTCGTCTGTCTTGAGGG 845355
Query 27424 TTG--TTCCTGA-TGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAG 27480
|| || | || || | ||| | |||| ||||||||||| ||| || | |||
Sbjct 845354 TTAGTTTTCAGAGTGTGAATCAC--CTGTTTG-AGCTGATCCACACCCTGACCGGTGTAA 845298
Query 27481 TCTACCCTCATG-TCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGG 27539
||| ||| ||| ||||||||||||| ||||| | ||||||||| || || || ||
Sbjct 845297 TCTGTG-TCACAATCCTTGTACTCTGCTCCAAAATGACGCCATTGGAAGCCATAGACAGG 845239
Query 27540 TCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACC 27599
|||||| || || || | ||| | || || ||| |||| ||| || |||| ||
Sbjct 845238 TCCCAGATCACCTTCACGTCGGTGTCCCAATCCAGCCTTTTCCAGAAACTCCTTGGACCC 845179
Query 27600 GTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCT 27659
|| |||||||||| | | || ||| || | ||| || |||| ||||
Sbjct 845178 ATTTCCGTCCCAGATGTGGATATTTTTGTCGCTCAGTTTCTTGCCGTCTGTGCACCCAGA 845119
Query 27660 GACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAG 27719
|| ||||| ||||| ||||||| ||| | | ||||||| ||||| || ||||| ||
Sbjct 845118 CACAAACCAGAGCAGTTCCTCCAAAACGCCTCTGTAAAAGACTCTCTTAGTGGTGAGTAG 845059
Query 27720 -GGGAAACTGTC 27730
|||| | ||||
Sbjct 845058 AGGGAGAATGTC 845047
>seq5
Length=2743614
Score = 96.9 bits (106), Expect = 3e-15
Identities = 137/186 (74%), Gaps = 10/186 (5%)
Strand=Plus/Plus
Query 48509 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTC-C 48567
|||||||||| || || | ||| ||| | ||| |||| || ||||||||||| || |
Sbjct 360082 TCGTCAAGGTAAGAATGCGAACCACCAAGATCCCCCAGATTGGAGACAAGTTTGCATCTC 360141
Query 48568 TTCACGGCGCAAAAGGGGACATGTGGAGC--CGTCCTGACCCAGGAGGACATGCC--CTT 48623
|||||| || ||||| || ||| | ||| ||| | ||||||||||| ||
Sbjct 360142 GTCACGGA-CAGAAGGGAACCATTGGTGTTACGTTTAGACAC--GAGGACATGCCGTTTT 360198
Query 48624 CGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGAT 48683
|| | || || ||||||||||| |||||||||||||||||||| |||| || | ||
Sbjct 360199 CGGC--CGAGGGAGTGGTGCCCGATATCATCATCAACCCCCACGCCATTCCTTCGCGTAT 360256
Query 48684 GACCGT 48689
||||||
Sbjct 360257 GACCGT 360262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369507114435989
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |