Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016- 03-01] 19 sequences; 21,758,297 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq5 165 1e-35 >seq5 Length=2743614 Score = 165 bits (182), Expect = 1e-35 Identities = 620/955 (65%), Gaps = 32/955 (3%) Strand=Plus/Minus Query 76270 AAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTAT 76329 |||||| | ||| || ||||||||||| || || || | || | | ||||| || || Sbjct 1439868 AAGAGCCACAGAAGCCAGATTACAAACAGCAACTTCTTCAGGAGACGAGTATTGAATAAT 1439809 Query 76330 CTCCGTGCATAGATTACTAC-ACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGT 76388 ||| || || | ||| | || | ||||| || || ||||| || |||||| || || Sbjct 1439808 CTCAGTACACAAATT-CGACGATTTGATCGTACCGAGATTCTGCTGGTTGGATTTCGCGT 1439750 Query 76389 TACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCG--ATAAT 76446 |||| ||| ||||| || | |||||| ||| ||||| || || | ||| | ||| Sbjct 1439749 TACAGCTGTCTTTATACAGCATGAACGGACCTCCTGTTTCGATTTG--ACTCGTGAGAAT 1439692 Query 76447 AGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTCTCTCTT-TCATATT 76505 | || | | | ||| || ||| ||| ||||| || || |||| ||||| | Sbjct 1439691 CGCCTTGAACAGCTCCTGAGCGTTGATTTGAGAATTGTACAGCCCCT-TCTTCTCATACT 1439633 Query 76506 GTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCG 76565 | || |||| || || || |||||||| |||||| ||| || ||| | | | Sbjct 1439632 CATTGTACAACCTCTCGAAATCGTCTCCCCAGACATCAGCCAGTCCTGGAGCTCTTCTGG 1439573 Query 76566 GACACATCAATGACCACT---CACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTA 76622 | || | | ||||| | | || | ||| || ||||||||| | |||||| | Sbjct 1439572 GGCAGAAAAGCGACCATTTTTCGCCGTTTTCG---ACTTTTTTCATAAACAAATCAGGCA 1439516 Query 76623 TCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAA 76682 ||| |||||| || || || || | ||| ||| || || ||| ||| | Sbjct 1439515 CCCAGAGAGCATAGAACAGGTCACGTGCTCTGTTTTCCTCTGCGCCATGATTTTTTCGCA 1439456 Query 76683 GATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCG 76742 || || || |||| |||||| | |||||| || || | ||| | || | | || | Sbjct 1439455 AATTCAGAAAATCCAAAATATCCGCATGCCAAGGCTCCAAATACACTGCAAACGCTCCAG 1439396 Query 76743 GTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTG 76802 ||||||| || || || ||||| | || | || || || || | ||||| | ||| | Sbjct 1439395 GTCGTTTGTTTCCCCCTTGATCAACGTACCGTGCGGTATTGTTGAACACTCTGAGCATGG 1439336 Query 76803 GAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATAT 76862 ||| || || ||| || | | || | ||| | ||| || | || | Sbjct 1439335 GAACGATACCTGAAGACCGTCCTTGAGAACCTGTAATGAGAGCTCCTTTGGCTCTGATGT 1439276 Query 76863 TACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATG 76922 | |||| || ||||| |||||||| |||| || || ||||||| ||| | | Sbjct 1439275 TGTGAATATGCAGACCTATACCTCCTGCTGTTTTGGAAATCTGAGCACACGTTTTGAGCG 1439216 Query 76923 TGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTT 76982 |||| |||||||| || || || | |||| || ||||||||| || | | Sbjct 1439215 TGTCGTAGATGCCGTCAATGGAGTCTGCTGCCATGGCAACGAGAAAACAGGACGAAAGCT 1439156 Query 76983 GATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAG 77042 || ||| ||| |||||||| ||||| |||||||| |||||||||||| ||| | || Sbjct 1439155 GACCCTGAGGAGTACCTGCATTGAACAAGGTAGGAGAAGCATGAGTGAAC--TTTCTGAG 1439098 Query 77043 ----AAAGTAGATTGTATGTTTCAATAAC--TGCTTCTAT-ATC-CCATTGATGAATTCC 77094 |||| ||| ||| ||||| | || || | ||| || || | |||| | Sbjct 1439097 AGATAAAGCAGA--GTACGTTTCGAGCACCTTGGTGGTATCGTCTCCGTGGATG----GC 1439044 Query 77095 TACAGCGACACGCATCAACATATGCTGAGGTCGTTCTAC-AGTCTTATTATTTATTTTCA 77153 || | || ||||| | ||| || ||||||| ||| || | || | | ||| ||| Sbjct 1439043 TAGTGATACTCGCATGAGCATCTGTTGAGGTCTTTCCACTACTCGT-CCCTGGATTCTCA 1438985 Query 77154 ACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCT 77208 | | ||| ||||||||||| || || || ||||| ||| ||| | | |||||| Sbjct 1438984 AAAGGTACGATTTTTCCAACGTCTTGAATCCAAAGTAGGAGTAAGTGAGGTCTCT 1438930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934230678080