Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030694_20[genbank_20GCA_5F001600515.1_202016-
03-01] 19 sequences; 21,758,297 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq2 163 6e-35
seq1 149 1e-30
seq6 91.5 3e-13
>seq2
Length=4150472
Score = 163 bits (180), Expect = 6e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || || ||||| | ||| || || ||||||||||||||||
Sbjct 3070618 ACCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 3070559
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||| ||||| || || || ||||| ||||| | || || ||||| ||
Sbjct 3070558 AAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 3070499
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||| | || ||| | ||||| ||||| |||| || ||
Sbjct 3070498 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 3070439
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTT 283101
|| || ||||| |||||||| || | ||||| || || ||||||||||
Sbjct 3070438 CTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 3070389
Score = 140 bits (154), Expect = 7e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || || ||||| | ||| || || ||||||||||||||||
Sbjct 3374808 ACCACCTCGGAGTCGCAGAACAAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 3374867
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||| ||||| || || || ||||| || || | || || ||||| ||
Sbjct 3374868 GAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATGAGTCGCTGCTGGTCCGGGGG 3374927
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||| | || ||| | || || ||||| |||| || ||
Sbjct 3374928 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCAC 3374987
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCA 283098
||||| ||||| ||||| || || | ||||| || || || ||||
Sbjct 3374988 CTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 3375034
>seq1
Length=4845111
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || || || || || || | ||| ||| || |||||||| ||||||| |
Sbjct 2006531 CCACCTCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTATAGTCAGAA 2006590
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || || ||||| || || || ||||| ||||| | || || ||||| ||
Sbjct 2006591 AGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGG 2006650
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|||||||||||||| |||||||| | || ||| | || || ||||| || | || ||
Sbjct 2006651 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCAACC 2006710
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| |||||||| ||||| || |||| |||||| || || ||||||||
Sbjct 2006711 TCAAGAGTGATAGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 2006757
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || || || || ||||| | ||| || || ||||||||||| ||||
Sbjct 2006954 CCACCTCGAAGTCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGAC 2007013
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || |||||||| || || || ||||| ||||| | || || ||||| |||
Sbjct 2007014 AGAGTTCGTCCATCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 2007073
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| || ||||| | || ||| | || || ||||| |||| || ||
Sbjct 2007074 ATTCCCTCCTTGTCCTGAATCTTAGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACC 2007133
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || |||| |||||| || || ||||||||
Sbjct 2007134 TCGAGGGTGATGGTCTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 2007180
Score = 136 bits (150), Expect = 8e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || || ||||| | ||| || || ||||||||||||||||
Sbjct 2007409 ACCACCTCGGAGTCGGAGGACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 2007468
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || ||||| || || || || || || || | || || ||||| ||
Sbjct 2007469 CAGAGTTCGTCCGTCCTCAAGCTGCTTTCCAGCGAAAATGAGTCGCTGCTGGTCCGGGGG 2007528
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| || ||||| | || ||| | || || ||||| |||| |||||
Sbjct 2007529 GATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCAGAAGACTCGAC 2007588
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| || |||| ||||| ||||| ||||||||
Sbjct 2007589 CTCAAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 2007636
Score = 123 bits (136), Expect = 5e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || ||||| |||||||| | || || || |||||||||||||| |
Sbjct 2007181 ACCACCTCGAAGTCGAAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 2007240
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || ||||| || || || || || || || || | || || ||||| ||
Sbjct 2007241 CAGAGTTCGTCCATCTTCGAGCTGCTTACCAGCGAAAATGAGTCGCTGCTGGTCCGGGGG 2007300
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| || ||||| | || || | || || ||||| || | |||||
Sbjct 2007301 AATTCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAGGACTCGAC 2007360
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || || || ||||| || || | ||||| ||||| ||||||||
Sbjct 2007361 CTCAAGGGTAATGGTCTTTCCAGTGAGGGTCTTCACGAAAATCTGCAT 2007408
Score = 116 bits (128), Expect = 8e-21
Identities = 135/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 317020 TCCTTCGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTG 317079
|||| || ||||| || || | ||| ||||| |||| || | |||||| || |||||
Sbjct 2675892 TCCTGGGTGGGGAAACCCTCGACCTGGCCGTTGGCAATGGCTCGCATCAGAGTAGACTTA 2675951
Query 317080 CCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTG 317139
|||||||| |||||||| || ||||| || || || ||| ||| | ||||
Sbjct 2675952 CCAGCACCGTTGGGGCCACACAGACCGTATCGTCGGCCTCGCTTGAGACGCAGCTGGGTT 2676011
Query 317140 TTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCG 317199
|||||| |||||||| |||| || ||||||||||||||||| | |||||| |||||
Sbjct 2676012 CGGTTCAGCAGAATCTTGGCACCGTAAGCCAGAGAGAACTCACAGTTACACAGATCCTCA 2676071
Query 317200 CC 317201
||
Sbjct 2676072 CC 2676073
Score = 102 bits (112), Expect = 2e-16
Identities = 125/171 (73%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || |||||||| | ||| || || || ||||||||||| |
Sbjct 2007637 ACCACCTCGGAGTCGGAGGACCAGATGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGA 2007696
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| || || || || || ||||| | || || ||||| ||
Sbjct 2007697 GAGGGTTCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGTCGCTGCTGGTCCGGGGG 2007756
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGA 283042
|| ||||||||||| || ||||| | || ||| | |||||||| || ||
Sbjct 2007757 GATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTATCGGA 2007807
>seq6
Length=2655350
Score = 91.5 bits (100), Expect = 3e-13
Identities = 160/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 230178 GTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAAT 230237
|||| | ||| |||||||| || || ||| | ||||| |||| |||| |||||
Sbjct 574977 GTTGGCATTGAGCAGGAGTTCCTTACTGATGCTCTCCCTTGTGGTCTGCTCGGTATGAAC 575036
Query 230238 GCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGG 230297
|| | |||||| | || || || || || || || || ||| | | || || || ||
Sbjct 575037 GCCAAGCTCATGCGACAGTACATTGAGTTTGTGGCCGACCGTCTGCTTGTTGCTCTTGGA 575096
Query 230298 TACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAG 230357
|| || || || ||||||| |||||||| | || |||||| |||||| ||
Sbjct 575097 AACCCCAAGGTCTACAACTCCACCAACCCCTTTGACTTCATGGAGAACATTTCTCTGGCT 575156
Query 230358 GGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
|| || || ||||||||||| ||||| || || || || | | |||||||
Sbjct 575157 GGAAAGACCAACTTCTTCGAGAAGCGAGTGTCTGACTACCAGAAGGCCGGTGT 575209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738945184426
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