Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq5 194 2e-44
>seq5
Length=2767003
Score = 194 bits (214), Expect = 2e-44
Identities = 573/876 (65%), Gaps = 23/876 (3%)
Strand=Plus/Minus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| ||| || || || ||||| ||||| || ||||| | || || || ||||||
Sbjct 1872731 TGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTCC 1872672
Query 16736 ATGAAATCAAAAGGATTAGT--AGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
||||| || || || || || || || | | || |||| || || | | | |
Sbjct 1872671 ATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTG--GAGTTGCCGAGAGCAACCAGCA 1872614
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853
| || || ||||| || || || |||||||| | | | ||||||||| | || |
Sbjct 1872613 GACGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGCAGTC 1872554
Query 16854 GTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA--T 16911
|| ||||| || |||| || ||||| ||| |||| || || ||| | |
Sbjct 1872553 CGCAGGGCAGAGCGTCGGTCAGGAACTCCTGCTCGATACCAACGGCCTCGACAATCACGT 1872494
Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971
|| | | || | || ||| ||| | | || || || | |||||| || ||
Sbjct 1872493 CCTCGACAATCTT--CTTGGAGGGTCGGTTCTCGAGGTGCGAGAAGAGCAGACAGGCAAA 1872436
Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031
||| || | |||||||||| | ||| || ||||| || || || | ||||||||
Sbjct 1872435 GTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCAT 1872376
Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091
||||| ||||| | ||| || || | ||||||||| || || ||||| || |||||
Sbjct 1872375 GAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAGATGCCCTC 1872316
Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151
||||| ||||| ||||| | || ||| | | |||| || | || ||||| ||
Sbjct 1872315 GACGGCGGCAAAGGCGATCAGCCGCTCGCCAAAGGTCGACTCGTCGTCGGAGATCCACTT 1872256
Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA----TA 17207
|| |||| ||||| || | ||| ||||| || || || ||||| || || ||
Sbjct 1872255 GAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTA 1872196
Query 17208 ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267
||| || ||| |||| | || || || ||||| || || |||| |||| |
Sbjct 1872195 GGTTCGCT----CCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTACGTTTCCG 1872140
Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327
|||| ||||||||||| ||||| || ||||| ||||| ||| || | | || |
Sbjct 1872139 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGACCTGCA 1872080
Query 17328 CTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAA 17387
| || || ||||||| ||| | || || |||||||| || || ||| || || || |
Sbjct 1872079 CCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGCAGCAAAGA 1872020
Query 17388 ACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG-----CCAGTC 17442
| |||| | ||| ||||| | |||| || ||| || | | ||||||
Sbjct 1872019 AGGCCAGCACGTGCGAGATGAAGAACCGCTCGT-CGTTGT-TGAGCCGGTTCTCCCAGTC 1871962
Query 17443 CTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTT 17502
| || ||| | ||| | || |||| |||||| ||| |||| | ||||| ||
Sbjct 1871961 GCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTT 1871902
Query 17503 ATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538
||||| | ||| || || | ||| || ||||||||
Sbjct 1871901 GTACATCTGCCAGATCTCGTGGTACTGGATGGGGAA 1871866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545334757880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |