Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6 138 1e-27 >seq6 Length=2636511 Score = 138 bits (152), Expect = 1e-27 Identities = 394/606 (65%), Gaps = 21/606 (3%) Strand=Plus/Plus Query 145679 GCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGT 145738 ||||||| | |||||||| | ||| || || ||||| |||| | ||||| | | Sbjct 2518928 GCTTCAGAGCGTCCACGTGATCCTTGTACACATGAGCGTCTCCCATGGTATGGATAAGCT 2518987 Query 145739 CCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTA 145798 | || || || | || | ||||| | ||| |||| ||| | ||| ||| | Sbjct 2518988 CTCCACAGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCATAGGAGGCAA 2519047 Query 145799 TGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGC- 145857 |||||||||| || ||||| |||| || | || |||||||||||||| || || ||| Sbjct 2519048 TGTTGAAGGGAACACCCAGACCCAGATCACATGACCGCTGGTACAGCTGACACGACAGCC 2519107 Query 145858 -TCCCCGC-------------CCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCA 145903 ||| ||| || ||||||||||||||| | | ||||||||| || | Sbjct 2519108 GTCCTCGCTCAGAGTTCTTGTACGACACGTAGAACTGGCAGAACATGTGGCAGGGAGGAA 2519167 Query 145904 GGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGG 145963 | ||||| || |||||| || ||||||||||| | || | || | | | || | Sbjct 2519168 GAGCCATTTTGGACAGGTCAGCGGGGTTCCAGGCTGACAGAATGATTCGACGGTCCTGAG 2519227 Query 145964 GGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAAT 146023 |||| | |||| |||| | ||||||| ||||| ||||| || ||||| Sbjct 2519228 GGTTGGTTTTGAGAGTGTGGATCACCTGTTTGAGCTGATCCACACCCTGGCCAGTGTAAT 2519287 Query 146024 CTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCC 146083 |||| | | ||| ||| |||| || || || | ||| ||||| || || || || | Sbjct 2519288 CTGTGTCACAATCCTTGTATTCGGCTCCAAAATGACGCCATTGGAAGCCATATACAGGTC 2519347 Query 146084 CCAGGTCCCCGGGCTC---CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACC 146140 ||||||| || ||| || || |||| || ||| | || || ||| ||| | Sbjct 2519348 CCAGGTCTCC---CTCACGTCTATGTCCCAATCCAGCCTTTTCCAGAAACTCCTTGGATC 2519404 Query 146141 CGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCC 146200 | || ||||||| || | | | | || |||| ||| ||| || | || Sbjct 2519405 CATTTCCGTCCCAAATATGAATGTTTTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCGG 2519464 Query 146201 TGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCA 146260 | |||||||| || || || | || || | | ||||||| ||| ||||||| || Sbjct 2519465 CCACAAACCAGAGAAGTTCCTCCAAAACGCCTCGGTAAAAGACCCGCTTTGTGGTCAACA 2519524 Query 146261 GGGGGA 146266 |||||| Sbjct 2519525 GGGGGA 2519530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076497585640