Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq1 120 3e-22
seq2 98.7 9e-16
>seq1
Length=4858313
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| |||| |||||||| || || |||||||| ||| || ||| || ||||||
Sbjct 3612743 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCCTCG 3612802
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || |||||| |||| || |||||||| || || || || ||||||||||| |
Sbjct 3612803 AGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGA 3612862
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | ||| || | | ||| ||||||| ||| | || ||
Sbjct 3612863 ATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTTT 3612922
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || ||||| ||||||||
Sbjct 3612923 CCAGTCAGGGTCTTGACAAAGATCTGCAT 3612951
Score = 96.9 bits (106), Expect = 3e-15
Identities = 119/163 (73%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| |||| |||||||| || || |||||||| ||| || ||| || ||||||
Sbjct 3613410 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCCTCG 3613469
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || ||| | ||||| |||||||| || || || || ||||||||||| |
Sbjct 3613470 AGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGA 3613529
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCT 118692
|| || || || | |||| |||||| | | ||||||||
Sbjct 3613530 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCT 3613572
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||||| || || || || || |||||||| ||| | || || |||||
Sbjct 3612514 CACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCGTCCTC 3612573
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| || |||||||| || || || || |||||||||||
Sbjct 3612574 AAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTG 3612633
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| ||||| | ||||||||||| ||| | || ||
Sbjct 3612634 GATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCGACCTCGAGGGTGATGGTCTT 3612693
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || || |||||||||||
Sbjct 3612694 TCCGGTAAGGGTCTTCACGAAAATCTGCAT 3612723
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|||||||| || || |||||||| || | || || |||||| ||||| || |||
Sbjct 3613194 GTAGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCGGCCATCCTCAAGCTGCTTACCA 3613253
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| | ||||| |||||||| || || || |||||||||||||| || || ||
Sbjct 3613254 GCGAAAATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 3613313
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | ||| || | | ||| ||||||| || | || || || || || ||
Sbjct 3613314 ACGTTGTCAATGGTATCGGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTGAGGGTC 3613373
Query 118722 TTTACAAAAATCTGCAT 118738
|| || |||||||||||
Sbjct 3613374 TTCACGAAAATCTGCAT 3613390
>seq2
Length=4160336
Score = 98.7 bits (108), Expect = 9e-16
Identities = 164/236 (69%), Gaps = 1/236 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| || | || || || | ||| | || ||||| || || |||||||| ||
Sbjct 1736792 TACCTCCTCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAG 1736851
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| || ||||||||||| || || ||| | || || |||||||| || || |
Sbjct 1736852 AAAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGG 1736911
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| |||||||||||||| || || || || | || | |||||| | ||| |
Sbjct 1736912 GAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCA 1736971
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA-TGGCTTA 118744
|||||| ||| | || ||||| || || || || ||||| || |||| ||| |||
Sbjct 1736972 CCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCACTGGGTTA 1737027
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || || |||||||| || | || || |||||||||||
Sbjct 1075025 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCGTCCTCGAGCTGC 1074966
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| || ||| |||| || |||||||| || || || || ||||||||||| || ||
Sbjct 1074965 TTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTG 1074906
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
|| || | |||| |||||| | ||| ||||| | ||| | || || |||||
Sbjct 1074905 GACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCGGTA 1074846
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||||||||||||
Sbjct 1074845 AGGGTCTTGACAAAAATCTGCAT 1074823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830183220372
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |