Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq2 109 4e-19 >seq2 Length=4160336 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 |||||| ||| ||||||||| ||||||||||| || || |||| || || || Sbjct 1736817 GTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCGGCCGTCCTCGAGCTG 1736876 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || |||||||| |||| ||||| ||||| || || | |||||||||||| || || Sbjct 1736877 CTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 1736936 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | ||||||||| | ||| || |||||||| || Sbjct 1736937 GGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGT 1736996 Query 45313 CAGAGTCTTCACAAAGATTTGCA 45335 || ||||| ||||||||||||| Sbjct 1736997 AAGGGTCTTGACAAAGATTTGCA 1737019 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193 || || ||| ||||||||| ||||||||||| || || |||| || || || Sbjct 1075025 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCGTCCTCGAGCTGC 1074966 Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253 || |||||||| || | ||||| ||||| || || | |||||||||||| || || Sbjct 1074965 TTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTG 1074906 Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313 ||| || | | | |||| | ||||||||| | ||| || ||||| || || Sbjct 1074905 GACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCGGTA 1074846 Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336 || ||||| ||||| || ||||| Sbjct 1074845 AGGGTCTTGACAAAAATCTGCAT 1074823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075002585861