Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq5 156 6e-33 >seq5 Length=2767003 Score = 156 bits (172), Expect = 6e-33 Identities = 392/591 (66%), Gaps = 6/591 (1%) Strand=Plus/Minus Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213 || ||| || || ||| ||| ||||||||||||| || | |||||||| || || Sbjct 1872447 CAGACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGT 1872388 Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 36273 ||| |||||||| || || ||||| || ||||| || ||||| || || || || || || Sbjct 1872387 GAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAA 1872328 Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA-ACCGGCAC--TGTC 36330 ||| || || || || || |||||||| || || | ||| ||| | || | | ||| Sbjct 1872327 GAAGATGCCCTCGACGGCGGCAAAGGCGATCAGCCGCTCGCCAAAGGTCGACTCGTCGTC 1872268 Query 36331 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 36390 |||||||| | ||||| ||||||||||| || | || || || ||||| || || Sbjct 1872267 GGAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 1872208 Query 36391 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 36450 || || || ||| || || || || || | ||||| || |||| || || Sbjct 1872207 GTTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTA 1872148 Query 36451 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGT 36510 | ||||||| || ||||| || || || || || |||||||| || | ||||||| Sbjct 1872147 CGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGG 1872088 Query 36511 AATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 36570 | ||| || || | ||||| || | | || || ||||| || || || || Sbjct 1872087 GACCTGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGC 1872028 Query 36571 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--TTGGTG-TTAGTTTATT 36627 ||||| || |||| || || || || | |||| ||| || | || | Sbjct 1872027 AGCAAAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGGTTCTC 1871968 Query 36628 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 36687 ||| || || || || | ||| | || || | ||||| || || ||||| || Sbjct 1871967 CCAGTCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGC 1871908 Query 36688 CTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 ||| || ||||| | |||||| || || || || || || || | ||||| Sbjct 1871907 CTTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAA 1871857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172462686440