Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq5 114 1e-20 >seq5 Length=2767003 Score = 114 bits (126), Expect = 1e-20 Identities = 362/554 (65%), Gaps = 13/554 (2%) Strand=Plus/Minus Query 13659 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13718 ||| ||||| || || || ||||| |||| || || ||||| || || || | Sbjct 1872444 ACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAG 1872385 Query 13719 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 13778 || ||||| | ||||| || || | ||| || || | ||||| || ||||| ||||| Sbjct 1872384 GCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAA 1872325 Query 13779 TATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGA 13838 || ||||| || || ||||| || || || || || ||||| | | | | || || Sbjct 1872324 GATGCCCTCGACGGCGGCAAAGGCGATCAGCCGCTCGCCAAAGGTCGACTCGTCGTCGGA 1872265 Query 13839 TATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATT 13898 ||||| || ||||| || | || || || || | || || ||||| || || Sbjct 1872264 GATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTT 1872205 Query 13899 GAATAAAT--GTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA-TA 13955 ||| | | |||| || | || ||||| ||||||| || || || | || | || Sbjct 1872204 GAACAGGTAGGTTCGCTCCTTGGGGTCCTTGA--TGTATGTGTCGATCAGCA-GCGAGTA 1872148 Query 13956 CATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG- 14014 | |||| ||||| ||||| || || ||||| || || || || || | || || | Sbjct 1872147 CGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGG 1872088 Query 14015 -ACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTA 14073 ||| || ||||| | | |||| || ||| ||| || || ||||||||||| | Sbjct 1872087 GACC--TGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAA 1872030 Query 14074 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGA---GTTTT 14130 || ||||| || |||| | || || ||| | |||| || ||||||| | || Sbjct 1872029 GCAGCAAAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGGTTC 1871970 Query 14131 TTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACA 14190 | ||| ||| | | ||||| ||||| | || || | ||||| ||| ||| | Sbjct 1871969 TCCCAGTCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCG 1871910 Query 14191 GCTTTTTTATACAT 14204 || || || ||||| Sbjct 1871909 GCCTTCTTGTACAT 1871896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588554723240