Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq5 307 2e-78
seq3 140 5e-28
>seq5
Length=2767003
Score = 307 bits (340), Expect = 2e-78
Identities = 594/871 (68%), Gaps = 29/871 (3%)
Strand=Plus/Plus
Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054
|| || |||||| ||| || || || ||| | |||||||| ||||| |||| || ||
Sbjct 1871863 CTCTTCCCCATCCAGTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTC 1871922
Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114
||||| | ||| ||| | ||||| ||||||| || ||| ||||||| || | |
Sbjct 1871923 TGGACCGCCGAGGAGATTGATCTCGGCAAGGACATGGGCGACTGGGAGAACCGGCTCAAC 1871982
Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174
| ||||| || || |||||| | ||||||||||||| | |||||||| ||
Sbjct 1871983 AACGACGAGCGGTTCTTCATCTCGCACGTGCTGGCCTTCTTTGCTGCTTCCGATGGTATT 1872042
Query 125175 GTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGC 125234
|| ||||| || ||| || |||||||| ||| || | || |||| ||||
Sbjct 1872043 GTGAACGAGAACCTGGTGGAGCGATTCTCCGGCGAGGTGCAGGTCCCCGAGGCCAAGTGC 1872102
Query 125235 TTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATT 125294
|| ||||| ||||| |||||||| |||||| | |||||||||| |||||| |||||
Sbjct 1872103 TTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTCGCTGCTGATC 1872162
Query 125295 GACATGTACATTCGCGATCCGCAACGTAAACACATGC-TCTTTAACGCAATCGACACGGT 125353
|||| ||||| || || ||| | || | | | || ||||| ||||| || |
Sbjct 1872163 GACACATACATCAAGGACCC-CAAGGAGCGAACCTACCTGTTCAACGCCATCGAGACCAT 1872221
Query 125354 GCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTC 125413
|| | || || ||||| | |||| | | ||||||| |||||| |||| |
Sbjct 1872222 CCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATCTCCGACGACGAGTCGAC 1872281
Query 125414 GTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTT 125473
| | ||| | ||| | || || |||||||| |||||||||||||| || || ||
Sbjct 1872282 CTTTGGCGAGCGGCTGATCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCGTT 1872341
Query 125474 TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGA 125533
|| ||||||| |||||||||||||| || ||||||||||| || || | |||||
Sbjct 1872342 CGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCAACGA 1872401
Query 125534 GTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT 125592
| | || || ||||||||||| || ||| ||||||||| ||| || || ||||| ||
Sbjct 1872402 GCTCATCTCCCGAGACGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCGCACCT 1872461
Query 125593 ATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAAC---ATTGTAACCGATG 125649
|||| | || || | | | | ||| || ||||| ||| |
Sbjct 1872462 ----------CGAGAACCGACCCTCCAAGAAGATTGTCGAGGACGTGATTGT---CGAGG 1872508
Query 125650 CCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGA 125709
|||| | || || || ||||| || ||||| | || || | | || | || ||||
Sbjct 1872509 CCGTTGGTATCGAGCAGGAGTTCCTGACCGACGCTCTGCCCTGCGGACTGCTCGGAATGA 1872568
Query 125710 ACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGA 125769
|| |||||| |||||| ||||||| |||||||| || || ||||| ||| ||||
Sbjct 1872569 ACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGTCTGCTG-----GTTGC 1872623
Query 125770 T-TGG----CCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATC 125824
| | | | |||| | |||||| ||| || ||||| || |||||| | ||| ||
Sbjct 1872624 TCTCGGCAACTCCAAGGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTC 1872683
Query 125825 ACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855
|| | || ||||||||||| |||||||||
Sbjct 1872684 GCTGGCCGGCAAGACCAACTTCTTCGAGAAG 1872714
>seq3
Length=2943663
Score = 140 bits (154), Expect = 5e-28
Identities = 378/570 (66%), Gaps = 14/570 (2%)
Strand=Plus/Minus
Query 96820 CCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGATACGTTACACAGG 96879
|||||||| | || || |||||||| ||| ||| | |||| || || ||||
Sbjct 1832422 CCAGTGGCATTGTTCCCATGCTCAGGGTGTTCAACAACACCGCACGGTATGTCGACCAGG 1832363
Query 96880 GCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTT 96939
| || || || || || || || | ||| |||| |||| || ||||| || || ||
Sbjct 1832362 GTGGAAACAAGCGTCCCGGAGCGTTTGCCATCTATCTGGAGCCCTGGCATGCCGATATTC 1832303
Query 96940 TTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGT 96999
| || || | | |||| |||||| || || ||| |||| || ||| |||
Sbjct 1832302 TCGATTTCCTGAACCTGCGGAAAAACCACGGAGCAGAGGAGAACAGAGCAAGAGACCTGT 1832243
Query 97000 TTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC-AACGACGGTGGCTACTGG 97058
| || ||| | |||||||| || ||||||||||||| ||| || || || | | |||
Sbjct 1832242 TCTACGCATTGTGGGTGCCGGACCTGTTCATGAAGCGGGTCGAAAGA-GGCGAAAAGTGG 1832184
Query 97059 AGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAG 97118
| | | || || | | | || || ||| || ||||| |||||||||
Sbjct 1832183 TCCTTGTTCTGTCCAAAGAAGGCCCCTGGGCTGGAAGACGTGTGGGGACCTGAGTTTGAG 1832124
Query 97119 GCCAAGTACACGGCCTACGAGCAAGAGGGCCGAT---ACGTG-AGACGAGTCGATGCACG 97174
|| ||| || |||||| || ||||| | ||| | ||| || | || |
Sbjct 1832123 CAGAAATACGAGGAGTACGAGAAAAAGGGCTTGTTCAACGCGCAGA----TCAACGCGCA 1832068
Query 97175 AGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTA 97234
|| |||| ||||| ||| | ||| |||| | || || ||| |||| ||| |||||
Sbjct 1832067 GGAGCTGTTCAAGGCGATCCTCACGAGTCAGATCGAAACCGGAGGACCGTTCATGCTCTA 1832008
Query 97235 CAAGGATACCGTGAATCGCAACAG--CAACCAACGCCACTTGGGCACCATCAAGGGCTCC 97292
|||||| | | || | ||||| || |||||| | || |||||||||||||| ||
Sbjct 1832007 CAAGGACAGC-TGCAACGCAA-AGTCCAACCAGCAGAACCTGGGCACCATCAAGTCGTCG 1831950
Query 97293 AATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTG 97352
||||||||||||||||| || ||||| | || || || ||| ||| || ||| |||
Sbjct 1831949 AATCTGTGCACGGAAATCGTCCAGTACTCGTCACCCGAAGAGGTGGCGGTGTGCAACCTG 1831890
Query 97353 GCATCGGTCAATCTGCCCAAGTTTGTAGAG 97382
|| || || | |||| ||||||| |||
Sbjct 1831889 GCGTCTGTAGCTTTGCCTGAGTTTGTCGAG 1831860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058820207160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |