Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 1e-11 >seq3 Length=2943663 Score = 84.2 bits (92), Expect = 1e-11 Identities = 135/186 (73%), Gaps = 10/186 (5%) Strand=Plus/Minus Query 71416 ACGGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCC 71475 |||||||| | ||||||| |||||||||||||||||||| |||||||| | || || Sbjct 394903 ACGGTCATACGCGAGGGAATGGCGTGGGGGTTGATGATGATATCGGGCACGATACCCTC- 394845 Query 71476 TTGTCG--AAGGGCATGTCCTCCTG--GGTCAGGACAGCTCCGCATGTCCCCTTTTGCGC 71531 | || || ||||| ||||| || ||| | | || | || || ||||| || | Sbjct 394844 -GGCCGAAAACGGCATATCCTCGTGTCGGT-ACGTCA-CACCAATGGTACCCTTCTG-TC 394789 Query 71532 CGTGA-ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCT 71590 ||||| || ||||||||||| || |||| ||| | ||| ||| | || | ||||| Sbjct 394788 CGTGACGCGAGGCAAACTTGTCTCCAATCTGGGGGATCTTGGTGGTTCGCATTCGCACCT 394729 Query 71591 TGACGA 71596 |||||| Sbjct 394728 TGACGA 394723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338764630723464