Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_005946.1
Length=105903
Score E
Sequences producing significant alignments: (Bits) Value
seq3 84.2 1e-11
>seq3
Length=2943663
Score = 84.2 bits (92), Expect = 1e-11
Identities = 135/186 (73%), Gaps = 10/186 (5%)
Strand=Plus/Minus
Query 71416 ACGGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCC 71475
|||||||| | ||||||| |||||||||||||||||||| |||||||| | || ||
Sbjct 394903 ACGGTCATACGCGAGGGAATGGCGTGGGGGTTGATGATGATATCGGGCACGATACCCTC- 394845
Query 71476 TTGTCG--AAGGGCATGTCCTCCTG--GGTCAGGACAGCTCCGCATGTCCCCTTTTGCGC 71531
| || || ||||| ||||| || ||| | | || | || || ||||| || |
Sbjct 394844 -GGCCGAAAACGGCATATCCTCGTGTCGGT-ACGTCA-CACCAATGGTACCCTTCTG-TC 394789
Query 71532 CGTGA-ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCT 71590
||||| || ||||||||||| || |||| ||| | ||| ||| | || | |||||
Sbjct 394788 CGTGACGCGAGGCAAACTTGTCTCCAATCTGGGGGATCTTGGTGGTTCGCATTCGCACCT 394729
Query 71591 TGACGA 71596
||||||
Sbjct 394728 TGACGA 394723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338764630723464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |