Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq2 246 8e-60
seq3 127 5e-24
>seq2
Length=4160336
Score = 246 bits (272), Expect = 8e-60
Identities = 620/927 (67%), Gaps = 14/927 (2%)
Strand=Plus/Plus
Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459
||||| ||||| | ||||||| || |||| || | | ||| || || || |||
Sbjct 4110351 AAGACCCTGGAGCGAGCCTACCTGCTGCGAGTCAACGGCGCTGTTGCCGAGCGACCCCAG 4110410
Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519
|| ||| | ||||| || || | |||||||| || | ||| || |||||
Sbjct 4110411 CAGATGATCATGCGAGTGTCTGTCGGTATCCACGGCGACAACATTGCCCGAGCCATTGAG 4110470
Query 363520 ACATATAAGCTTCTAAGTGCTCGT--GTA-TTCACGCACGCCACGCCAACAATGTACAAT 363576
|| || || || | | || ||| ||| ||||| ||||| | || || |||||||
Sbjct 4110471 ACCTACAA-CTAC-ATGT-CTCAGAAGTACTTCACCCACGCTTCCCCTACCCTGTACAAC 4110527
Query 363577 GCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCC 363636
|| ||||| | | || |||||||| || || || ||| | || ||||||||||| |||
Sbjct 4110528 GCAGGAACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTTGTCAACATGAAGGACGACTCC 4110587
Query 363637 ATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGA 363696
||||| || |||| ||||| || |||| ||||||||| || |||||| || || ||
Sbjct 4110588 ATCGACGGCATCTACGACACCCTCAAGACTTGTGCTCTCATCTCCAAGTCCGCTGGAGGT 4110647
Query 363697 ATTGGTGTATCGATCCACAATGTTCGTG-CACAGAACAGTTACATTCGCGGCACAGGGGG 363755
|||||| | || |||||||| | || | ||| | | |||||| ||| || ||
Sbjct 4110648 ATTGGTCTGTCCATCCACAACATCCGAGCCACCGGA-TCCTACATTGCCGGAACCAACGG 4110706
Query 363756 ATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGA 363815
||| || || | || |||||||| ||||| | |||| || || | ||||||||
Sbjct 4110707 TACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTACAACAACACCGCTCGATACGTCGA 4110766
Query 363816 CCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGA 363875
|||||| || ||||| || || ||||| ||||| || ||||| || | ||
Sbjct 4110767 CCAGGGAGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCTGGAGCCCTGGCACGATGA 4110826
Query 363876 TATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGA 363935
| || ||||| ||||| || || ||| || || ||||| | || || || ||
Sbjct 4110827 CGTCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGTAAGGAGGAGATCCGAGCCCGAGA 4110886
Query 363936 TCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAG-- 363993
||||||| || || ||| | | |||| || ||| |||| || || ||| | | |
Sbjct 4110887 TCTGTTCCTGGCTCTCTGGATCCCCGACCTGTTCATGGAGCGAGTCGA-GCA-GAACGCC 4110944
Query 363994 AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGAC 364053
| ||| | ||| | ||||| |||| || || || || || || | ||||||||
Sbjct 4110945 GAGTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTCGATGACGTCTACGGTGACGAG 4111004
Query 364054 TATGTTGC-TCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGC 364112
| | || || ||||| |||| || |||||| | ||| || || || ||
Sbjct 4111005 T-TCAAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGAGGTCGACGAACCATCCCTGC 4111063
Query 364113 ACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTT 364172
|||||||| |||| ||| |||| | |||| ||| | || | |||| ||| |
Sbjct 4111064 CCAGAAGCTGTGGTACCACATTCTGGACTGCCAGACCGAGTCCGGTAACCCCTTCATGCT 4111123
Query 364173 GTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAG 364232
||||| || | |||||||| ||||||||||| || |||| ||||| || ||
Sbjct 4111124 CTACAAGGACGCCTGCAACCGAAAGTCCAACCAAAAGAACCTGGGTACCATCAAGTCTTC 4111183
Query 364233 CAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCT 364292
|||||| ||| ||||||| | || ||| | |||| || ||| || || || |||||
Sbjct 4111184 CAACCTGTGTTGCGAGATTGTCGAGTACTCTTCTCCTGATGAGGTCGCTGTCTGCAACCT 4111243
Query 364293 TGCGTCGATCGCGCTTCCGGCGTTTGT 364319
|| || ||||| || || | |||||
Sbjct 4111244 GGCTTCCATCGCTCTGCCCACCTTTGT 4111270
Score = 122 bits (134), Expect = 2e-22
Identities = 337/512 (66%), Gaps = 10/512 (2%)
Strand=Plus/Plus
Query 364651 CAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCC 364710
|||||||| || ||||| || || || || | | ||| | ||||| || ||
Sbjct 4111614 CAGTTTGACCTGTGGAACGTGACTCCCTCCGAGCTCTGGGAGTGGGACGATCTCAAGGCC 4111673
Query 364711 AACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCT 364770
|| | | |||| ||| | || ||||| || | || |||||||| || |||||
Sbjct 4111674 AAGATCATGAAGACTGGAATGCGAAACTCGCTGCTGGTGGCCCCCATGCCTACTGCTTCC 4111733
Query 364771 ACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCA 364830
||| | ||||| ||||| ||||||||||||||| || | || ||| |||| ||
Sbjct 4111734 ACTTCTCAGATTCTCGGCTTCAACGAGTGCTTCGAGCCCTACACCTCCAACATTTACTCT 4111793
Query 364831 CGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCC 364890
|| || || ||| | || || || | | | || || | || ||||||| ||
Sbjct 4111794 CGACGAGTGCTTGCTGGTGAGTTCCAGATTGTCAACCCCTGGCTGCTCAAGGACCTGGTT 4111853
Query 364891 GACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTG 364950
|| || |||||| || | |||||||||| ||| | |||| || || || |||
Sbjct 4111854 GAGGTTGGTCTGTGGAACGAGACCATGAAGAACCGAATCGTGGCCGACAACGGATCCGTG 4111913
Query 364951 CAGAACAT-TCCAGGAT-TTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAA 365008
|||||||| ||| || |||| ||||| ||| | ||||| ||||| ||||| |
Sbjct 4111914 CAGAACATCCCCAACATCCCCCAGGAGATC--AAGGACCTGTACAAGACCGTGTGGGAGA 4111971
Query 365009 TTTC---CATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGA 365065
|||| | ||||| |||| || ||||| ||||| || | || || |||
Sbjct 4111972 TTTCTCAGAAGCGAA---TCATCGAGATGGCTGCCGACCGATCCCCCTTCATTGACCAGT 4112028
Query 365066 GCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATT 365125
|||||| | ||| | ||| | | || ||| | |||||| || |||||||| |
Sbjct 4112029 CCCAGTCCCTCAACATCCACATCAAGGACCCCACCATGGGCAAGCTCACTTCCATGCACT 4112088
Query 365126 TCTACGGGTGGAAATCCGGTCTTAAGACAGGT 365157
||||||| ||||| ||||| ||||| |||
Sbjct 4112089 TCTACGGCTGGAAGAAGGGTCTCAAGACCGGT 4112120
>seq3
Length=2943663
Score = 127 bits (140), Expect = 5e-24
Identities = 376/576 (65%), Gaps = 4/576 (1%)
Strand=Plus/Minus
Query 363441 TATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGA 363500
||| |||||||| || || |||||| | ||||| || ||| | || |||||| | ||
Sbjct 1832742 TATAGTTGAACGTCCTCAACATATGCTCATGCGCGTGGCTCTGGGGATCCATGGAGACGA 1832683
Query 363501 TGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTC-GTGTATTCACGCACGCC 363558
| | | | | | ||||| || | | ||| || |||| | |||||| |||||
Sbjct 1832682 TATCGCCAAGGTGCTGGAAACGTACACGGCTCT--GTCGCTCAGAAAATTCACACACGCT 1832625
Query 363559 ACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTA 363618
| || || | | |||||| || |||| | ||| |||| || || ||||| |
Sbjct 1832624 TCTCCCACGCTTTTCAATGCCGGTACTCCCCAGGGACAACTGTCGTCCTGTTTTCTGGTG 1832565
Query 363619 AAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATT 363678
||| ||| |||||||| || |||| || || || |||| ||||| | ||
Sbjct 1832564 GCTATGGCATCCGACTCCATCGACGGAATCTACGATACCCTCAAGACGTGTGCGCAAATC 1832505
Query 363679 TCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTAC 363738
|| || | || || || || ||| | || || ||| | | || || | |
Sbjct 1832504 TCGAAAACGGCTGGAGGTATCGGTCTGCATATTCATAATATCAGGGCCAAGGGTGCTATC 1832445
Query 363739 ATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAAT 363798
||| || | ||| || | ||| | ||||||||||| | ||||| ||||
Sbjct 1832444 ATTACTGGGTCTCAAGGAAGGTCCAGTGGCATTGTTCCCATGCTCAGGGTGTTCAACAAC 1832385
Query 363799 ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858
|| || |||| ||||||||||||||| ||||| || |||||||| || |||||
Sbjct 1832384 ACCGCACGGTATGTCGACCAGGGTGGAAACAAGCGTCCCGGAGCGTTTGCCATCTATCTG 1832325
Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAG 363918
||||| |||||||||||| | || || || | || ||||||||| ||| ||||
Sbjct 1832324 GAGCCCTGGCATGCCGATATTCTCGATTTCCTGAACCTGCGGAAAAACCACGGAGCAGAG 1832265
Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978
|| | ||| | || |||||||| ||| | ||||| | |||| || ||||||||
Sbjct 1832264 GAGAACAGAGCAAGAGACCTGTTCTACGCATTGTGGGTGCCGGACCTGTTCATGAAGCGG 1832205
Query 363979 GTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCA 364014
|| || ||| | || ||||| | || || |||
Sbjct 1832204 GTCGAAAGAGGCGAAAAGTGGTCCTTGTTCTGTCCA 1832169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352915332062
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |