Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq5 150 2e-31
seq1 127 2e-24
seq2 116 3e-21
seq3 100 3e-16
>seq5
Length=2767003
Score = 150 bits (166), Expect = 2e-31
Identities = 340/501 (68%), Gaps = 29/501 (6%)
Strand=Plus/Plus
Query 46099 AAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGT 46158
||||| ||||||||||| | ||||||||| | | | |||| || | ||||||
Sbjct 1872235 AAGAAGGCCGACTGGGCGCTCAAGTGGATCTCCGACGACGAGTCGACCTTTGGCGAGCGG 1872294
Query 46159 ATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTT 46218
|| | |||||||| || |||||| |||| || || ||| || ||| |||||||
Sbjct 1872295 CTGATCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCGTTCGCCTCCATCTTC 1872354
Query 46219 TACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCG 46277
| |||| || | ||| | ||||||||||||| || || ||||||||| || || ||
Sbjct 1872355 TGGCTCAAGAAGCGAGGTC-TCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCG 1872413
Query 46278 CGACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACA-CTCGCGTGCACGAC 46335
|||||||| ||||| || |||||||| ||||| || | | || |||| | | ||||
Sbjct 1872414 AGACGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCGCACCTCGAGAAC-CGAC 1872472
Query 46336 --------AAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTG 46387
||| ||| ||| |||| | ||| ||||| || | || |
Sbjct 1872473 CCTCCAAGAAGATTG---TCGAGGACGTGAT-----TGT----CGAGGCCGTTGGTATCG 1872520
Query 46388 AGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAA 46447
|| ||||||| | || | ||| |||||| | ||||| || |||||||| || |
Sbjct 1872521 AGCAGGAGTTCCTGACCGACGCTCTGCCCTGCGGACTGCTCGGAATGAACGCCAAGCTCA 1872580
Query 46448 TGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCT-TCACCAGC-CGAA 46505
||||| | ||||| |||||||| || ||||| ||||| || ||| || || | | ||
Sbjct 1872581 TGTGCCAGTACATTGAGTTTGTCGCCGACCGTCTGCTGGT--TGCTCTCGGCAACTCCAA 1872638
Query 46506 GCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAAC 46565
| | || | ||| || || || || ||| | |||||||| |||| ||||| ||
Sbjct 1872639 GGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCCGGCAAGAC 1872698
Query 46566 TAATTTTTTCGAAAAGCGCGT 46586
|| || ||||| ||||| ||
Sbjct 1872699 CAACTTCTTCGAGAAGCGGGT 1872719
>seq1
Length=4858313
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | || ||||| | || | || || ||||| || |||||||| |||
Sbjct 3612496 GCCACCTCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 3612555
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| || |||||| |||||||| || ||| |||| | |||||||||||||| ||
Sbjct 3612556 GAGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 3612615
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| ||| || ||||| | || | ||| || | |||||||
Sbjct 3612616 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCGAC 3612675
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || ||||| || || || ||||||||||||||
Sbjct 3612676 CTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 3612723
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | ||| | || |||||||| || |||||||| ||| |
Sbjct 3612725 CCACCTCGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 3612784
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| |||||||| || ||| |||| | |||||||||||||| ||
Sbjct 3612785 AGAGTTCGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 3612844
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | ||||||| |||||| |
Sbjct 3612845 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAACC 3612904
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | ||| || || || || || || || || ||||||||
Sbjct 3612905 TCGAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 3612951
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
|| |||||||| || |||||||| || | ||| || ||||| |||||||| ||
Sbjct 3613194 GTAGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCGGCCATCCTCAAGCTGCTTACCA 3613253
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
||| | || | |||||||||||||| || || || || ||||| ||| || ||||
Sbjct 3613254 GCGAAAATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 3613313
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | ||||||| |||||| | |||| || | ||| || || || || ||
Sbjct 3613314 ACGTTGTCAATGGTATCGGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTGAGGGTC 3613373
Query 131218 TTTACGAAAATCTGCAT 131234
|| ||||||||||||||
Sbjct 3613374 TTCACGAAAATCTGCAT 3613390
Score = 87.8 bits (96), Expect = 2e-12
Identities = 126/178 (71%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | ||| | || |||||||| || |||||||| ||| |
Sbjct 3613392 CCACCTCGAAGTCGGAGAACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 3613451
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || |||||| |||||||| || ||| | || | |||||||||||||| ||
Sbjct 3613452 AGAGTTCGTCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGA 3613511
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
||||| || ||||| || || ||||| | || | || |||| ||||||||
Sbjct 3613512 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGA 3613569
Score = 84.2 bits (92), Expect = 2e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 51810 GTTGCCGAGATCGCCCACGTGTCGCTCGGCGGAGTTGGGTGCGCCGTGGTGTTTGCCAAG 51869
||| ||||| || || ||||||||||||| | | |||| || ||||||| || |
Sbjct 2020387 GTTTCCGAGGTCACCAACGTGTCGCTCGGAGTCGGTGGGGGCACCGTGGTTCTTCTTGAA 2020446
Query 51870 GGGATTAAAGTGCTCGCCGGCGGACGTGCACCCGTTGCTGGTGTCGCCGAACTCGTGCAC 51929
||| || ||||| ||| || || ||||| |||||| || |||| || |||||||| ||
Sbjct 2020447 GGGGTTGAAGTGGGGGCCAGCAGAAGTGCAGCCGTTGGTGTTGTCACCAAACTCGTGGAC 2020506
Query 51930 GTGAAAGCC 51938
||| || ||
Sbjct 2020507 GTGGAATCC 2020515
>seq2
Length=4160336
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||| || | ||| | || |||||||| || |||||||| ||
Sbjct 1075049 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1074990
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| |||||||| || ||| |||| | |||||||||||||| ||
Sbjct 1074989 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 1074930
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 1074929 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1074870
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || |||||||| || || || || |||||||||||
Sbjct 1074869 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1074823
Score = 89.7 bits (98), Expect = 5e-13
Identities = 148/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079
||||| || | || | || |||||||| || |||||||| || | || || |
Sbjct 1736806 CGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCGGCCG 1736865
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
||||| ||||||||||| ||| | || | |||||||||||||| || || || || |||
Sbjct 1736866 TCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 1736925
Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199
|| ||| || ||||| | || | || |||| ||||| | |||| ||| | |
Sbjct 1736926 TCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATG 1736985
Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCA 131233
|| || || || || || || || || || ||||
Sbjct 1736986 GTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 1737019
>seq3
Length=2943663
Score = 100 bits (110), Expect = 3e-16
Identities = 357/546 (65%), Gaps = 19/546 (3%)
Strand=Plus/Plus
Query 145631 GACGCCAAATTACAAACTGCCGTCTCCTCGGC-GTCGCTGTATTGTACGATCTCGGCGCA 145689
||||||| || || || ||| ||| |||| | || ||| || ||||| || | |||
Sbjct 1831885 GACGCCAGGTTGCACACCGCCACCTCTTCGGGTGACGA-GTACTGGACGATTTCCGTGCA 1831943
Query 145690 CAAATTGCTAC-ATTTGATGGTTCCCAGATTTTGCTGATT--ACTTTTCCTGTTGCACGC 145746
|| ||| | || | |||||||| ||||| || ||||| || ||||| | ||||||
Sbjct 1831944 CAGATT-CGACGACTTGATGGTGCCCAGGTTCTGCTGGTTGGACTTTGC--GTTGCAGCT 1832000
Query 145747 GTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTG 145806
|||||||||||||||| ||||||| || || || | ||| || | ||| |
Sbjct 1832001 GTCCTTGTAGAGCATGAACGGTCCTCCGGTTTCGATCTGACTCGTGAGGATCGCCTTGAA 1832060
Query 145807 CAAGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAG 145866
|| |||||||| | |||| | | | ||||| || ||||| | | |||
Sbjct 1832061 CAGCTCCTGCGCGTTGATCTGCGCGTTGAACAAGCCCTTTTTCTCGTACTCCTCGTATTT 1832120
Query 145867 CTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAG 145926
|| ||||||| | | || | || ||| || || ||| || ||||| | ||
Sbjct 1832121 CTGCTCAAACTCAGGTCCCCACACGTCTTCCAGCCCAGGGGCCTTCTTTGGACAGAACAA 1832180
Query 145927 CGACCA---TACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGC 145983
||||| | |||| | | ||| |||| ||| |||| || |||||||||| ||
Sbjct 1832181 GGACCACTTTTCGCCTCT---TTCGACCCGCTTCATGAACAGGTCCGGCACCCACAATGC 1832237
Query 145984 GTACATCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCAC 146043
||| | || ||| | ||| || ||||| || || |||| | || || || |
Sbjct 1832238 GTAGAACAGGTCTCTTGCTCTGTTCTCCTCTGCTCCGTGGTTTTTCCGCAGGTTCAGGAA 1832297
Query 146044 A-CTATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG- 146101
| | | | || || || ||||| || || | ||||| ||| | ||||| || |||
Sbjct 1832298 ATCGAGA-ATATCGGCATGCCAGGGCTCCAGATAGATGGCAAACGCTCCGGGACGCTTGT 1832356
Query 146102 --CCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGC 146159
||||||||||| || | ||| | ||||||| || || | | |||||| | | ||
Sbjct 1832357 TTCCACCCTGGTCGACATACCGTGCGGTGTTGTTGAACACCCTGAGCATGGGAACAATGC 1832416
Query 146160 CGCTGG 146165
| ||||
Sbjct 1832417 CACTGG 1832422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012558093440
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