Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq3 96.9 2e-15
>seq3
Length=2943663
Score = 96.9 bits (106), Expect = 2e-15
Identities = 267/409 (65%), Gaps = 3/409 (1%)
Strand=Plus/Minus
Query 6193 CGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAA 6252
||||| | |||||||| ||||| ||||| |||| ||||| | ||||| ||||
Sbjct 1150518 CGGACCCTTTCTACCGGTACAAGATGCCTGCCATCACGTCCAAGATTGAGGGCCGAGGAA 1150459
Query 6253 ACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTG 6312
||||||| || |||| | | ||||| |||| || ||| || ||| | |||
Sbjct 1150458 ACGGTATCAAGACCGCCGTGATCAACGGCTCTGACGTGGCTCGAGCTCTCAACAGACCTC 1150399
Query 6313 CCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACA 6372
|| | ||| | || || || || ||| ||||| || ||||| ||| || |
Sbjct 1150398 CCTCTTACGTCATCAAGTACTTTGGAATCGAGCTTGGAGCCCAGACCCAGATTTCCGAGG 1150339
Query 6373 AAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTG 6432
| || || || | | | || ||||| ||| || |||| ||||||||| || |
Sbjct 1150338 ACAAGGACCGGTACCTGGTCAACGGCCAGCACGACGCTGCGTCTCTGCAGGACACCCTGG 1150279
Query 6433 ACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTA 6492
||||||| || | ||||||||| ||| || ||| | ||||| ||||||||||| |
Sbjct 1150278 ACGGCTTCATCAACCGGTTTGTGCTCTGTGAGGCCTGCAAGAACCCCGAGACCGAGCTCA 1150219
Query 6493 TTGTGTCTACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCA 6552
| | | | || || | |||| | | | |||||| || ||||| | | |
Sbjct 1150218 TCATCGCCAAGAACGGAGA---CATCACCCGAGACTGCAAGGCCTGCGGAAAGCGAACCC 1150162
Query 6553 AGCTGGATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCC 6601
|||| | |||||||||| ||||||||| | ||||| |||||
Sbjct 1150161 CCGTGGACATCCGACACAAACTCGCCACCTTCATTGTCAAGAACCCTCC 1150113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334947032631071
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |