Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq3 96.9 2e-15 >seq3 Length=2943663 Score = 96.9 bits (106), Expect = 2e-15 Identities = 267/409 (65%), Gaps = 3/409 (1%) Strand=Plus/Minus Query 6193 CGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAA 6252 ||||| | |||||||| ||||| ||||| |||| ||||| | ||||| |||| Sbjct 1150518 CGGACCCTTTCTACCGGTACAAGATGCCTGCCATCACGTCCAAGATTGAGGGCCGAGGAA 1150459 Query 6253 ACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTG 6312 ||||||| || |||| | | ||||| |||| || ||| || ||| | ||| Sbjct 1150458 ACGGTATCAAGACCGCCGTGATCAACGGCTCTGACGTGGCTCGAGCTCTCAACAGACCTC 1150399 Query 6313 CCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACA 6372 || | ||| | || || || || ||| ||||| || ||||| ||| || | Sbjct 1150398 CCTCTTACGTCATCAAGTACTTTGGAATCGAGCTTGGAGCCCAGACCCAGATTTCCGAGG 1150339 Query 6373 AAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTG 6432 | || || || | | | || ||||| ||| || |||| ||||||||| || | Sbjct 1150338 ACAAGGACCGGTACCTGGTCAACGGCCAGCACGACGCTGCGTCTCTGCAGGACACCCTGG 1150279 Query 6433 ACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTA 6492 ||||||| || | ||||||||| ||| || ||| | ||||| ||||||||||| | Sbjct 1150278 ACGGCTTCATCAACCGGTTTGTGCTCTGTGAGGCCTGCAAGAACCCCGAGACCGAGCTCA 1150219 Query 6493 TTGTGTCTACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCA 6552 | | | | || || | |||| | | | |||||| || ||||| | | | Sbjct 1150218 TCATCGCCAAGAACGGAGA---CATCACCCGAGACTGCAAGGCCTGCGGAAAGCGAACCC 1150162 Query 6553 AGCTGGATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCC 6601 |||| | |||||||||| ||||||||| | ||||| ||||| Sbjct 1150161 CCGTGGACATCCGACACAAACTCGCCACCTTCATTGTCAAGAACCCTCC 1150113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947032631071