Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq5 196 5e-45 >seq5 Length=2767003 Score = 196 bits (216), Expect = 5e-45 Identities = 414/617 (67%), Gaps = 3/617 (0%) Strand=Plus/Minus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || ||||||||||| || | ||| |||||||| || || | ||| ||| ||| || | Sbjct 1872443 CAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGG 1872384 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | || ||||| ||||||||||| || || || || || || || || || Sbjct 1872383 CCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAG 1872324 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271 || || || ||||| ||||| || | | || ||| |||| | | | | | Sbjct 1872323 ATGCCCTCGACGGCGGCAAAGGCGATCAGCCGCTCGCCAAAGGTCGACTCGTCGTCGGAG 1872264 Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331 ||||| || | ||||| ||||| || ||||| || || || | || ||||| ||||| Sbjct 1872263 ATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTTG 1872204 Query 93332 AATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391 || ||||| |||||| | | || |||||||| ||||| | ||| || ||| || Sbjct 1872203 AACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTACGTT 1872144 Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451 || || |||| |||||||| || ||||| |||||||| || | || || | || | Sbjct 1872143 TCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGACC 1872084 Query 93452 TGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCa 93511 ||||| || || |||| ||| || || || || || || ||||||||||| || ||| Sbjct 1872083 TGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGCAGCA 1872024 Query 93512 aaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCCAA 93568 || || |||| | ||| || || ||| || | || ||| || ||||| Sbjct 1872023 AAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGGTTCTCCCAG 1871964 Query 93569 TCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTT 93628 ||| | || || ||||| | || ||| | ||||| || || || || || || Sbjct 1871963 TCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTC 1871904 Query 93629 TTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTA 93688 |||||||| | ||| || || || || || || || || | ||||| || |||| Sbjct 1871903 TTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAACCGGCGGTGGTTC 1871844 Query 93689 TCTTTTAGTAACGGCTC 93705 || || || | |||||| Sbjct 1871843 TCCTTGAGCAGCGGCTC 1871827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860514608840