Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq5 196 5e-45
>seq5
Length=2767003
Score = 196 bits (216), Expect = 5e-45
Identities = 414/617 (67%), Gaps = 3/617 (0%)
Strand=Plus/Minus
Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151
|| ||||||||||| || | ||| |||||||| || || | ||| ||| ||| || |
Sbjct 1872443 CAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGG 1872384
Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211
|| || | || ||||| ||||||||||| || || || || || || || || ||
Sbjct 1872383 CCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAG 1872324
Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271
|| || || ||||| ||||| || | | || ||| |||| | | | | |
Sbjct 1872323 ATGCCCTCGACGGCGGCAAAGGCGATCAGCCGCTCGCCAAAGGTCGACTCGTCGTCGGAG 1872264
Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331
||||| || | ||||| ||||| || ||||| || || || | || ||||| |||||
Sbjct 1872263 ATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTTG 1872204
Query 93332 AATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391
|| ||||| |||||| | | || |||||||| ||||| | ||| || ||| ||
Sbjct 1872203 AACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTACGTT 1872144
Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451
|| || |||| |||||||| || ||||| |||||||| || | || || | || |
Sbjct 1872143 TCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGACC 1872084
Query 93452 TGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCa 93511
||||| || || |||| ||| || || || || || || ||||||||||| || |||
Sbjct 1872083 TGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGCAGCA 1872024
Query 93512 aaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCCCAA 93568
|| || |||| | ||| || || ||| || | || ||| || |||||
Sbjct 1872023 AAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGGTTCTCCCAG 1871964
Query 93569 TCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTT 93628
||| | || || ||||| | || ||| | ||||| || || || || || ||
Sbjct 1871963 TCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTC 1871904
Query 93629 TTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTA 93688
|||||||| | ||| || || || || || || || || | ||||| || ||||
Sbjct 1871903 TTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAACCGGCGGTGGTTC 1871844
Query 93689 TCTTTTAGTAACGGCTC 93705
|| || || | ||||||
Sbjct 1871843 TCCTTGAGCAGCGGCTC 1871827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860514608840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |