Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq5 156 9e-33
seq1 125 1e-23
seq2 114 3e-20
>seq5
Length=2767003
Score = 156 bits (172), Expect = 9e-33
Identities = 554/856 (65%), Gaps = 16/856 (2%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| |||| ||||| ||||||||||||||||||||| |||
Sbjct 1872710 TCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 1872651
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| ||||| ||||| | ||| || || || | | ||||| || |||||||| |
Sbjct 1872650 GAGTTGTAGACCTTGGAGTTGCCGAGAGCAACCAGCAGACGGTCGGCGACAAACTCAATG 1872591
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| | ||| || | | |||||| || | || | || || | || || | |
Sbjct 1872590 TACTGGCACATGAGCTTGGCGTTCATTCCGAGCAGTCCGCAGGGCAGAGCGTCGGTCAGG 1872531
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC-CTGTGCCAGAGACAG 251801
|| |||| ||| | |||| ||||| | | | ||| || | | | | || |
Sbjct 1872530 AACTCCTGCTCGATACCAACGGCCTCGACAATCACGTCCTCGACAATCTTCTTG-GAGGG 1872472
Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861
|||||| || | ||| | || || | |||| | ||||||||||||||| ||
Sbjct 1872471 TCGGTTCTCGAGGTGCGAGAAGAGCAGACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCG 1872412
Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921
||||| ||||||||| | ||||| ||||| | || || ||| ||||||||||
Sbjct 1872411 GGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAA 1872352
Query 251922 GATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGCG 251981
||| | | || || || ||||| | | |||||||| | | || | || ||
Sbjct 1872351 GATGGAGGCGAACGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCAAAGGCGATCAGCCG 1872292
Query 251982 CTCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCTTTCC 252038
||| |||| ||||| ||| | || | |||| | ||||| | ||||||||
Sbjct 1872291 CTCGCCAAAGGTCGACTCGTCGTCGGAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTT 1872232
Query 252039 AACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTCGAT 252098
| |||||| || ||||| || | || || || | ||||| ||||| |||
Sbjct 1872231 GATGCAGGGGATGGTCTCGATGGCGTTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGAT 1872172
Query 252099 GAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCTGGTA 252158
| | || | ||| || |||||| | ||||| |||||| || | | |||||| |
Sbjct 1872171 GTATGTGTCGATCAGCAGCGAGTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAA 1872112
Query 252159 AGCATAGAA----TAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGTTTGCAA 252214
| ||||| | | | | || ||| | || || ||| || | | |
Sbjct 1872111 GCCGTAGAAGCACTTGGC-CTCG---GGGACCTGCACCTCGCCGGAGAATCGCTCCACCA 1872056
Query 252215 TGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAAGT 252274
|||||| |||| || |||||| | ||||||||| | || | | | |||||||
Sbjct 1872055 GGTTCTCGTTCACAATACCATCGGAAGCAGCAAAGAAGGCCAGCACGTGCGAGATGAAGA 1871996
Query 252275 GACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAGGAACTT 252334
||||| |||| ||||||| || ||||||| | ||||||| ||| || |
Sbjct 1871995 ACCGCTCGTCGTTGTTGAGCCGGTTCTCCCAGTCGCCCATGTCCTTGCCGAGATCAATCT 1871936
Query 252335 CTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACAT-TGCGAACACATCAGGGTAC 252393
| || | |||||||| | | | | |||||||||||||| ||| | | || |||||
Sbjct 1871935 CCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATCTGC-CAGATCTCGTGGTAC 1871877
Query 252394 TTGATTGGGAA-AGCA 252408
| ||| ||||| ||||
Sbjct 1871876 TGGATGGGGAAGAGCA 1871861
>seq1
Length=4858313
Score = 125 bits (138), Expect = 1e-23
Identities = 189/266 (71%), Gaps = 6/266 (2%)
Strand=Plus/Plus
Query 279702 TCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCC 279761
|||||||| ||||| ||||||||||||||||| || | |||| | || | |||
Sbjct 2148790 TCTCTGTCTGGTGGATGGAAGATGAAGCTGGCTCTTGCCACCGCCGTCCTCCGAAAGGCC 2148849
Query 279762 GATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTA 279821
||| |||| |||||||||||||| |||||||| |||| ||| |||||| || |||||
Sbjct 2148850 GATATCCTGCTGCTTGATGAGCCCACCAACCATCTGGATACCGTCAACGTTGCTTGGCTG 2148909
Query 279822 GTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGC 279881
|| |||||| | || ||| | | | | ||| |||| ||||| |||||||||||
Sbjct 2148910 GTCAACTACCTCAACA-CCTGTGG--TATCACCTCCATCATCGTCTCCCACGACTCTGGT 2148966
Query 279882 TTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCTCCAAG 279941
||||| || ||| || ||| || ||||| |||| | | |||||| |||
Sbjct 2148967 TTCCTCGACAACGTCTGTGAGTACATTATCCACTACGAGCGA---TTCAAGCTCCGAAAG 2149023
Query 279942 CACATCGGCAACCTGTCTGCTTTCGT 279967
||| || ||||| || | |||||
Sbjct 2149024 TACAAGGGTAACCTCTCCGAGTTCGT 2149049
Score = 118 bits (130), Expect = 2e-21
Identities = 133/174 (76%), Gaps = 3/174 (2%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|| |||||||||||| ||||||| ||||| || || || |||| ||||||||||| |||
Sbjct 2148436 GGAGAGGATCTGTGTAACTGTGAGTTCTCTCTGGCTTACGGTGCCAAGATTCTGCTGAAC 2148495
Query 279405 TCTACCC-GCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463
|||| || || || ||||||| ||| || || |||||| || ||||| || ||
Sbjct 2148496 CGAACCCAGCTTCGAC-TCAAGCGAGGCCGACGATACGGTCTCTGTGGCCCCAACGGTGC 2148554
Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCC 279517
|||||| ||| || ||||| |||||||| ||||| ||| | | ||| |||||
Sbjct 2148555 TGGTAAGTCCACCCTGATGCGAGCCATTGCCAACGGCCAGGTCG-AGGGTTTCC 2148607
Score = 95.1 bits (104), Expect = 2e-14
Identities = 118/162 (73%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 280677 CTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAG 280736
|| ||||| || |||||| || ||||||| || || || ||||| ||||| || |||
Sbjct 2149807 CTTGGTCTCGAGCCCGAGCTTGTCTCTCACTCCCGAATCCGAGGTCTGTCTGGTGGACAG 2149866
Query 280737 AAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGAC 280796
|||||||| || || | | || | ||||| | || || |||||||||| ||
Sbjct 2149867 AAGGTCAAGCTGGTGCTTGCCGCCTGTACCTGGCAGCGACCCCATCTGATCGTTCTTGAT 2149926
Query 280797 GAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838
|||||||||||||||||||| || || || || ||||||
Sbjct 2149927 GAGCCTACCAACTATCTGGATCGAGACTCTCTTGGAGCTCTG 2149968
>seq2
Length=4160336
Score = 114 bits (126), Expect = 3e-20
Identities = 413/637 (65%), Gaps = 13/637 (2%)
Strand=Plus/Minus
Query 293140 CGATCAGCAGCGAGGTCAATCACTGTCTTCATAGAGATCTCCCACGATGTCTTGTACACT 293199
|| || ||||| | || || | | |||| ||| ||||||||| ||||||||||
Sbjct 4112008 CGGTCGGCAGCCATCTCGATGATTCGCTTCTGAGAAATCTCCCACACGGTCTTGTACAGG 4111949
Query 293200 GCCTTGACATCAGGATGAATGCCAATAACCTTCTGGATAGACCCTCCGTTGGCAATAATC 293259
|||||| || | | ||| | ||||| | || || || ||| | ||
Sbjct 4111948 TCCTTGATCTCCTGGGGGATGTTGGGGATGTTCTGCACGGATCCGTTGTCGGCCACGATT 4111889
Query 293260 TGGTTCTTCATTGTCTCGGACCA-AGTCCCACGAGCAATGAGCTCGCGGACAAGGTAAGA 293318
|||||||||| |||||| ||| || || || ||| || || || || | |
Sbjct 4111888 CGGTTCTTCATGGTCTCGTTCCACAGACCAACCT-CAACCAGGTCCTTGAGCAGCCAGGG 4111830
Query 293319 GTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGTAAATGTTCGAAGTGATGGG 293378
|||||||| ||||||||||||| || || || ||||||||| || ||| |||
Sbjct 4111829 GTTGACAATCTGGAACTCACCAGCAAGCACTCGTCGAGAGTAAATGTTGGAGGTGTAGGG 4111770
Query 293379 TTCGGCTGCCTCAACAGACCCGCAAATCTGAGCAGTAGATGCGGTAGGCATAAGAGCAGT 293438
||| ||| | ||| |||||||| ||| || || |||||||| | ||
Sbjct 4111769 CTCGAAGCACTCGTTGAAGCCGAGAATCTGAGAAGTGGAAGCAGTAGGCATGGGGGCCAC 4111710
Query 293439 CGTCAGAGAGTTCCTCACACC---CTTCTTGACACGCGATTCGAGACCCGCCCAGTCC-A 293494
| ||| ||||| | || || |||| ||| | | |||| | |||| ||| |
Sbjct 4111709 CAGCAGCGAGTTTCGCATTCCAGTCTTCATGATCTTGGCCTTGAGATCGTCCCACTCCCA 4111650
Query 293495 GAGCAGTCTGAGGT-GTAACACCCCAGAGATGATACTGCATGATACCCTTGCTGGCAGGA 293553
|||| || |||| || || ||| || | | |||||| | ||||||| |||||||
Sbjct 4111649 GAGC--TCGGAGGGAGTCACGTTCCACAGGTCAAACTGCAGGTCACCCTTGGAGGCAGGA 4111592
Query 293554 GACCCCTCAAAGGTGGGATGGGGGCCATGCTCATCAGAGAGCTCGCAAGATGCCTCAACA 293613
|| |||| ||||| | | || | |||| | | |||| |||| ||||||||
Sbjct 4111591 GAGCCCTGGAAGGTCTCGTAAGCACCGTCCTCAAGGGCCATCTCGTAAGAAGCCTCAACG 4111532
Query 293614 GCAGCAAAGTAAATGTGCTCGAAGATCTCACGGTTGAGCTTGCGAGCCTGCTCAGAGTCA 293673
||| | ||| ||| ||||||||||| ||||||||| |||| ||| || ||
Sbjct 4111531 GCACCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACTCG 4111472
Query 293674 AACGGCATCTTCAGCTGG--AAGAACACATCCTGCAGACCCTGTACACCTACACCAACGG 293731
|| |||| || | || | ||| ||| ||||||||| ||||| | | ||| ||
Sbjct 4111471 AAGGGCA--GTCGGAGGGCCATGAAGGTATCAGCCAGACCCTGGACACCCAGAGCAATGG 4111414
Query 293732 GGCGACGACGCTTGTTGCTCGTCTCTGCCTCGGGAAC 293768
| || | ||| ||||| | ||| ||||| || ||
Sbjct 4111413 GTCGGTGTCGCATGTTGGACTTCTTGGCCTCAGGGAC 4111377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836260064481
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