Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq5 232 1e-55
seq2 159 6e-34
seq1 158 2e-33
>seq5
Length=2767003
Score = 232 bits (256), Expect = 1e-55
Identities = 595/893 (67%), Gaps = 25/893 (3%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
||||||||| ||||||||||| || || ||||| |||||||||||||| |||||| |
Sbjct 1872747 CATGACGCCGGCCTTCTGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGC 1872688
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
|| || ||| |||||||||||| |||||||| || | | ||||| || ||
Sbjct 1872687 CAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTGGAGTTGCC 1872628
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || | | ||||| || || ||||| |||||||||| ||| || | | |||
Sbjct 1872627 GAGAGCAACCAGCAGACGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTT 1872568
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
||| || | || | |||||| | |||||| | ||| |||| ||| | | || |
Sbjct 1872567 CATTCCGAGCAGTCCGCAGGGCAGAGCGTCGGTCAGGAACTCCTGCTCGATACCAACGG- 1872509
Query 10175 TTCCTCGACGATGCTCTTTACCACGTCAA------GGGACAGCTTGTTCTCGAGCTTCGA 10228
||||||| || | | | || || ||| ||| | ||||||||| | |||
Sbjct 1872508 --CCTCGACAAT-CACGT--CCTCGACAATCTTCTTGGAGGGTCGGTTCTCGAGGTGCGA 1872454
Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288
| || || |||| | ||| || |||||||| ||| ||||| |||||||||
Sbjct 1872453 GAAGAGCAGACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGA 1872394
Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348
|| || ||||||||||| || || || |||||||| |||| | |||||| ||
Sbjct 1872393 GAAGGTGAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCC 1872334
Query 10349 GGAGAACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAG---GAG 10403
||||| |||||| ||||| ||| | |||||| || ||||| | ||| ||
Sbjct 1872333 GGAGA--AGAAGATGCCCTCGACGGCGGCAAAGGCGATCAGCCGCTCGCCAAAGGTCGAC 1872276
Query 10404 CGGTCGCGCGAAAAGTATTTCGAG-GCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGT 10462
|||| || | | || ||| ||||| | |||||||| | | ||||| ||
Sbjct 1872275 TCGTCGTCGGAGATCCACTT-GAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGT 1872217
Query 10463 CTCGATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAG 10522
|||||| || | ||| || | | | ||||| | ||||| || | || | ||
Sbjct 1872216 CTCGATGGCGTTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAG 1872157
Query 10523 CAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CATAC 10581
||| ||||| || ||||| | |||| | |||| | ||||||| ||
Sbjct 1872156 CAGCGAGTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTT 1872097
Query 10582 GTGCCGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGC 10641
| ||| |||| || || || ||| || | ||||||||| |||| || |
Sbjct 1872096 G-GCCTCGGGGACCTGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATAC 1872038
Query 10642 CATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCA 10701
||||| | ||||||||| | || | |||| ||||||| ||||| || | ||| |
Sbjct 1872037 CATCGGAAGCAGCAAAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGA 1871978
Query 10702 G-TTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAA 10760
| ||| | |||||| ||| |||| | ||| | | |||||| |||||||||||
Sbjct 1871977 GCCGGTTCTC-CCAGTCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAA 1871919
Query 10761 GTGGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813
| || ||||||||||||||||||| | || ||| ||||| ||||||||||
Sbjct 1871918 GAAGCCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAA 1871866
Score = 116 bits (128), Expect = 7e-21
Identities = 441/674 (65%), Gaps = 30/674 (4%)
Strand=Plus/Plus
Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037
|| |||||||| | |||||||||||| ||| | ||| ||| | ||| | || || | |
Sbjct 1785887 TATCGCCACTGCAGGTACTGGTTGGGCGTCTTTTCCTTGTGCTGCTCCACGTGCTGCAGA 1785946
Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097
|| |||||||| | ||| | || |||| |||||| |||||| || |||| |||
Sbjct 1785947 GCGTGCTGGGCAATGTATCCGATTCGCAGGTTGGGGTGCTTCTCGACCTTGCCCTCAGTA 1786006
Query 225098 GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCA 225157
|| | || ||||| ||||||||||| || || | ||| || || || ||||| ||
Sbjct 1786007 GGCACAACTTCACCGGTCAGGACCTTGATCAGGGTCGACTTTCCGGCTCCGTTGGGACCC 1786066
Query 225158 ATCACGCCAATCCGGGATGACATTG-CAACCTGCGAGTTCACGTTGCTGAAGA----TCT 225212
| || | | || || | ||| | || | | || |||| || |||| ||
Sbjct 1786067 AGAACCGCGACTCGAGACGCCATGGACAGCGAACAAG-AGGCGTT-CTTAAGAGAGGGCT 1786124
Query 225213 CAGGGCCAGTTTGGTAAGCAAAGGCCACGCCACG-CAGCTTCATG--ATGGCACGGTCCT 225269
||| | | |||| | |||| | || || || | || | ||||| ||| |
Sbjct 1786125 TGGGGGCGTTGGGGTAGGTGAAGG--AGGCGTCGACAAC-TCGGGCAATGGCTCGGGTGT 1786181
Query 225270 TGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTT--GGTCACCGCGTC 225327
|||| | ||| ||| | ||||| ||||| || ||| ||| | |||
Sbjct 1786182 TGGATCGCACACCTGACAGAATTCCGGGAGGAGGGAAGGCCATCTTCAGGT--TGGAGTC 1786239
Query 225328 CTTCAGGTCGTAGTAAG--ATGCAGCCTCGGGTCG--CTTTGCCACGAAAGCAGACAGGT 225383
||||| |||||| | ||| |||| ||||| | ||| |||||| | | |||||
Sbjct 1786240 GGTCAGGGTGTAGTAGGCCTTGC--CCTCAGGTCGCACCTTG--ACGAAATCGGCCAGGT 1786295
Query 225384 TTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTG 225443
| || || | ||||| || |||||||| ||| |||| | | || || |
Sbjct 1786296 TACCCTTGTAGTAGACCAGCTT---CTTGTTCTCGTAGTGAGCAATGTCGGTACAGACGG 1786352
Query 225444 CGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGA 225503
|||| |||||||| |||||||| || ||||| | || | | || || || | |
Sbjct 1786353 CGTCCAGGAAGCCGGAGTCGTGTGAAACAATCAGAGAGGTGATGTCGGTATGGGCAACCA 1786412
Query 225504 GGTGCGTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGA 225562
||| || || ||||| ||||||| || |||| ||||| ||||| ||||| ||
Sbjct 1786413 GGT-AGTCCTGCAGCCACTTGACGTTGCCCACATCCAGATGGTTAGTAGGCTCGTCGAGC 1786471
Query 225563 AGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCC 225622
||||| ||||| || | ||||| ||||| || | || ||||||||| ||||| ||
Sbjct 1786472 AGCAGAATGTCGGCCTTCATGAGCATGGCTCGGGCCAGCTCCAGCTTCATCTTCCACCCT 1786531
Query 225623 CCGGACAGGGAGCC 225636
|| ||||| | |||
Sbjct 1786532 CCAGACAGAGCGCC 1786545
>seq2
Length=4160336
Score = 159 bits (176), Expect = 6e-34
Identities = 171/226 (76%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||| || || |||| || | ||| || |||||||| || |||||||| || || ||
Sbjct 1736794 CCTCCTCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1736853
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| || |||| || ||||| || |||
Sbjct 1736854 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGA 1736913
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| || |||||||| | || || ||
Sbjct 1736914 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 1736973
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460
|| | ||||||||| || || || ||||||||||| || || ||||
Sbjct 1736974 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 1737019
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| || | || || |||||||| || |||||||| || || ||
Sbjct 1075049 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1074990
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| || |||| || ||||| || |||
Sbjct 1074989 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 1074930
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| | ||||||| ||||||||||| | || || ||
Sbjct 1074929 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1074870
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| | |||||| || || || || ||||||||||| || |||||||||
Sbjct 1074869 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATT 1074822
>seq1
Length=4858313
Score = 158 bits (174), Expect = 2e-33
Identities = 155/200 (78%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 68262 AGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTC 68321
|| || ||||| || |||||||| || || ||||| || | ||||| || | ||||||
Sbjct 3613191 AGAGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCGGCCATCCTCAAGCTGCTTA 3613250
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| ||||| ||||||| || ||||| || |||||||| |||||||| || ||||| | |
Sbjct 3613251 CCAGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGAC 3613310
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|||||| || ||||| || | || || || || | |||||||| ||||| ||||||
Sbjct 3613311 TTGACGTTGTCAATGGTATCGGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTGAGG 3613370
Query 68442 GTCTTGACGAATATCTGCAT 68461
||||| ||||| ||||||||
Sbjct 3613371 GTCTTCACGAAAATCTGCAT 3613390
Score = 152 bits (168), Expect = 9e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||| || || || ||||| || |||||||| || |||||
Sbjct 3612725 CCACCTCGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 3612784
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || |||| || ||||| || |||
Sbjct 3612785 AGAGTTCGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 3612844
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| |||||||| | ||||||| || ||||| || | || || ||
Sbjct 3612845 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAACC 3612904
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| ||||| || ||||||||||| || ||||||||
Sbjct 3612905 TCGAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 3612951
Score = 125 bits (138), Expect = 1e-23
Identities = 475/730 (65%), Gaps = 19/730 (3%)
Strand=Plus/Minus
Query 225280 ACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTCAGGTCGTA 225339
|||||| ||||| |||||||||||||| | ||| || | | | | ||| |||||
Sbjct 2149137 ACCCTCAAGGAAACCGGGCTCGGGGAAAGAGAAGTTGATCTCGGAGGCACCCAGCTCGTA 2149078
Query 225340 GTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAGGTGCTTCGT 225399
||| || || || ||| ||||| | || ||||| || || |||
Sbjct 2149077 GTAGGACTTGGCGGAAGGAACCTTCTTGACGAACTCGGAGAGGTTACCCTTGTACTTTCG 2149018
Query 225400 GAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGAAGCCAGA 225459
|||||||| || |||||| || | ||| | || || ||| ||||| |||||
Sbjct 2149017 GAGCTTGAA--TCG-CTCGTAGTGGATAATGTACTCACAGACGTTGTCGAGGAAACCAGA 2148961
Query 225460 GTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGATGAGCCA 225519
||||||||| || |||||||| | | | | |||| ||||||| ||| |||||
Sbjct 2148960 GTCGTGGGAGACGATGATGGAGGTGA--TACCACAGGTG-TTGAGGTAGTTGACCAGCCA 2148904
Query 225520 TGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATGTCAGCATC 225579
|| |||||| | |||| ||||| || || || || || |||||||| || || |
Sbjct 2148903 AGCAACGTTGACGGTATCCAGATGGTTGGTGGGCTCATCAAGCAGCAGGATATCGGCCTT 2148844
Query 225580 AATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGGGAGCCGAT 225639
||||| |||| | |||| ||||||||| ||||| || || ||||| ||| |||
Sbjct 2148843 TCGGAGGACGGCGGTGGCAAGAGCCAGCTTCATCTTCCATCCACCAGACAGAGAGGTGAT 2148784
Query 225640 TGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGAGCGTCT---GGATAATGCG 225696
| | | | | | ||| || | | || || ||| || |||
Sbjct 2148783 GGGCATTCGGGTCATCTCGTCGGTGAACAGGAAGTCAAGCAGCTGCTTTCGGACCTCCTC 2148724
Query 225697 CTCGGGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGAGAGGTAATCATATACGGTCAT 225756
||||| | | || || || || | |||| || || ||| || ||| | |
Sbjct 2148723 CTCGGTACCGATG-GACTCGC--CG--GCGGTCTTTCG-GACGTAGTCGACAACGTTGGT 2148670
Query 225757 GTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCT-GAGAAGCAT 225815
||| | | | |||||||||||||||| ||| | || || || || | | |
Sbjct 2148669 GTCGGCGTGGGTACCGTCAATGTCGTGGTCGACGAAGACAGTTCGACACTCGTCCTGGGT 2148610
Query 225816 CGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGC 225875
|||||| ||||| | |||||| || ||||| || || | |||||| ||| || || |
Sbjct 2148609 -GGGGAAACCCTCGACCTGGCCGTTGGCAATGGCTCGCATCAGGGTGGACTTACCAGCAC 2148551
Query 225876 CGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGC-GCGTGGAGTTC 225934
||||||| || ||| ||||| | || ||||||| || || || | || ||||
Sbjct 2148550 CGTTGGGGCCACAGAGACCGTATCGTCGGCCTCGCTTGA-GTCGAAGCTGGGTTCGGTTC 2148492
Query 225935 AGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCC 225994
|| || |||||| |||| || || || |||||||| || | ||||| ||||| |||||
Sbjct 2148491 AGCAGAATCTTGGCACCGTAAGCCAGAGAGAACTCACAGTTACACAGATCCTCTCCCTCG 2148432
Query 225995 TCGGTCTCCT 226004
||| |||||
Sbjct 2148431 TCGTCCTCCT 2148422
Score = 125 bits (138), Expect = 1e-23
Identities = 128/167 (77%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | |||| || || || ||||| || |||||||| || |||||
Sbjct 3613392 CCACCTCGAAGTCGGAGAACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 3613451
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| |||||||| ||||||| || ||||| || |||
Sbjct 3613452 AGAGTTCGTCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGA 3613511
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTC 68401
|| || |||||||| |||||||| | ||||||| |||||||||||
Sbjct 3613512 ATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTC 3613558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621927668520
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