Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq6 156 4e-33 >seq6 Length=2636511 Score = 156 bits (172), Expect = 4e-33 Identities = 385/575 (67%), Gaps = 27/575 (5%) Strand=Plus/Plus Query 20189 TTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGG-GTCTAAGACCAGTAAC 20247 ||||| | || || ||||||| || || |||| ||| || ||| | || | || || Sbjct 2518951 TTGTACACATGAGCGTCTCCCATGGTATGGATAAGCTCTCCACAGTCCA-GATCGGTCAC 2519009 Query 20248 ATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACC 20307 || |||| ||| ||| || || | |||| ||||||||| || ||||| |||| ||| Sbjct 2519010 CTGGGCAATCATTCGAGTCAACAGAGCATAGGAGGCAATGTTGAAGGGAACACCCAGACC 2519069 Query 20308 CATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGC--TCACCG-TCAG---------- 20354 || || | |||| ||| ||||||||||| || ||| || || |||| Sbjct 2519070 CAGATCACATGACCGCTGGTACAGCTGACACGACAGCCGTCCTCGCTCAGAGTTCTTGTA 2519129 Query 20355 CTACA--TAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGC 20412 | ||| || || || || |||| ||| ||||| ||||| ||||| |||| ||| || Sbjct 2519130 CGACACGTAGAACTGGCAGAACATGTGGCAGGGAGGAAGAGCCATTTTGGACAGGTCAGC 2519189 Query 20413 CGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTAT----TAAAT 20468 |||||||| || ||| |||||||| | || || || || |||| | | || Sbjct 2519190 GGGGTTCCAGGCTGACAGAATGATTCGACGGTCCTGAGGGTTGGTTTTGAGAGTGTGGAT 2519249 Query 20469 CCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGT 20528 | | ||| || || || | |||||||| || || || | || ||| || Sbjct 2519250 CACC--TGTTTGAGC--TGATCCACACCCTGGCCAGTGTAATCTGTGTCACAATCCTTGT 2519305 Query 20529 ACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTC 20588 | | || ||||| || | ||| ||||| || || |||||||||| || ||||| | || Sbjct 2519306 ATTCGGCTCCAAAATGACGCCATTGGAAGCCATATACAGGTCCCAGGTCTCCCTCACGTC 2519365 Query 20589 TGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648 | || ||| || | |||| |||||| |||| |||||| |||||| || | || Sbjct 2519366 TATGTCCCAATCCAGCCTTTTCCAGAAACTCCTTGGATCCATTTCCGTCCCAAATAT-GA 2519424 Query 20649 CTCCTGTTCTTGAA-AGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCT 20707 | | || | | |||| | || ||| |||| || || |||||| || || || Sbjct 2519425 ATGTTTTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCGGCCACAAACCAGAGAAGTTCC 2519484 Query 20708 TGCACTACGCCTCGCCAAAACACCCGCTTTGTGGT 20742 | || |||||||| |||| |||||||||||||| Sbjct 2519485 TCCAAAACGCCTCGGTAAAAGACCCGCTTTGTGGT 2519519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372573796440