Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq5 131 4e-25
seq1 114 3e-20
>seq5
Length=2767003
Score = 131 bits (144), Expect = 4e-25
Identities = 216/309 (70%), Gaps = 7/309 (2%)
Strand=Plus/Plus
Query 333687 TCGGTAAGGGCGTAGTAA--CTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGAT 333744
||||| |||| |||||| || || || || ||| ||| ||||| |||| ||| |
Sbjct 1786238 TCGGTCAGGGTGTAGTAGGCCTTGCCC--TCAGGTCGCACCTTGACGAAATCGGCCAGGT 1786295
Query 333745 TTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAG 333804
| |||||||| | |||||| ||| ||||| || ||| ||| || || |
Sbjct 1786296 TACCCTTGTAGTAGACCAGCTTCTTGTTC---TCGTAGTGAGCAATGTCGGTACAGACGG 1786352
Query 333805 CGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCA 333864
|||| ||||| |||||||||||||| ||||||| | | | ||| || || | ||
Sbjct 1786353 CGTCCAGGAAGCCGGAGTCGTGTGAAACAATCAGAGAGGTGATGTCGGTATGGGCAACCA 1786412
Query 333865 GGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAA 333924
|||| || ||||||| | ||||| |||| |||||||| || |||||||| || |
Sbjct 1786413 GGTAGTCCTGCAGCCACTTGACGTTGCCCACATCCAGATGGTTAGTAGGCTCGTCGAGCA 1786472
Query 333925 GTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTC 333984
| || | | || |||| |||||| || || || || | || ||||| ||||||||||
Sbjct 1786473 GCAGAATGTCGGCCTTCATGAGCATGGCTCGGGCCAGCTCCAGCTTCATCTTCCACCCTC 1786532
Query 333985 CTGAAAGAG 333993
| || ||||
Sbjct 1786533 CAGACAGAG 1786541
Score = 118 bits (130), Expect = 2e-21
Identities = 552/865 (64%), Gaps = 25/865 (3%)
Strand=Plus/Plus
Query 242875 TTCCCCATCCAGTATCCGGATATGTGGGATATGTATAAGAAGGCAGTGGCAACCTTTTGG 242934
|||||||||||||| | || || ||| | ||||| |||||||| | ||| | || |||
Sbjct 1871866 TTCCCCATCCAGTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGG 1871925
Query 242935 ACCACCGAGGAAGTTCCTCTGAACGCAGACGTCGTCGACTGGCGCGAGAAAC---TCAAT 242991
||| ||||||| || ||| | ||| | | ||||||| ||||| | ||||
Sbjct 1871926 ACCGCCGAGGAGATTGATCTCGGCAAGGACATGGGCGACTGG---GAGAACCGGCTCAAC 1871982
Query 242992 GACGACGAACGTCATTTCATCAAACACATTCTAGGTTTTTTCGCAGGCTCCGATGGTATT 243051
||||||| || |||||| ||| | || | || || || | ||||||||||||
Sbjct 1871983 AACGACGAGCGGTTCTTCATCTCGCACGTGCTGGCCTTCTTTGCTGCTTCCGATGGTATT 1872042
Query 243052 GTGATGGAAAATCTGCAG-ACCAACTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCA 243110
|||| || || ||| | | | | | | | | | || ||| || ||||| |
Sbjct 1872043 GTGAACGAGAACCTGGTGGAGCGATTCTCCGGCG-AGGTGCAGGTCCCCGAGGCCAAGTG 1872101
Query 243111 ATTTTATGCTTACCAAACATTCAACGAATCTATCCATTCTGAACAATATGCTCTTCTTAT 243170
|| || | | ||| | | | || ||||| || ||| || | || || ||
Sbjct 1872102 CTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTCGCTGCTGAT 1872161
Query 243171 CGACGCGCTTATTTCAGATGAAC---AAGAGCGAAACGAGCTTTTCGACGCCATCGAAAA 243227
|||| | || ||| | || | | ||||||| | | || ||| |||||||||| |
Sbjct 1872162 CGACACA--TACATCA-AGGACCCCAAGGAGCGAACCTACCTGTTCAACGCCATCGAGAC 1872218
Query 243228 CATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAAGTGGCTA---GAACCCG-GTA 243283
||| || | | || ||||| | ||||| | |||||| | || || ||
Sbjct 1872219 CATCCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATCTCCGACGACGAGTC 1872278
Query 243284 AATCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGA 243343
| | || || ||||| || |||||| | ||| || || || | || |||||
Sbjct 1872279 GACCTTTGGC-GAGCGGCTGATCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCT 1872337
Query 243344 GTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 243403
||| | ||||||| ||||| ||| |||| | ||||| |||||| | || |
Sbjct 1872338 CGTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCA 1872397
Query 243404 ACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAA 243463
||||| ||||| || |||||||| || ||| | || | || | | ||
Sbjct 1872398 ACGAGCTCATCTCCCGAGACGAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCGC 1872457
Query 243464 AGCTCCAGAACAAGCTACCATTCGAAACG---GTCAAACAAATCATCACAGAAGCAGTTG 243520
| ||| ||||| | ||| | | | | | ||| | | | || || || ||||
Sbjct 1872458 ACCTCGAGAAC---CGACCCTCCAAGAAGATTGTCGAGGACGTGATTGTCGAGGCCGTTG 1872514
Query 243521 AAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTG 243580
| ||| |||| ||| | ||||||| | || ||| | || | || |||||| |
Sbjct 1872515 GTATCGAGCAGGAGTTCCTGACCGACGCTCTGCCCTGCGGACTGCTCGGAATGAACGCCA 1872574
Query 243581 AACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATG 243640
| |||||| | |||||||| || || || |||||||| | | | || || || |
Sbjct 1872575 AGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGTCTGCTGGTTGCTCTCGGCAACT 1872634
Query 243641 AGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGA 243700
|| || |||||||||| |||||||| | ||| |||||| ||| ||||| || |
Sbjct 1872635 CCAAGGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCCGGCA 1872694
Query 243701 AAACTAACTTCTTCGAAAAGCGTGT 243725
| || ||||||||||| ||||| ||
Sbjct 1872695 AGACCAACTTCTTCGAGAAGCGGGT 1872719
>seq1
Length=4858313
Score = 114 bits (126), Expect = 3e-20
Identities = 132/175 (75%), Gaps = 2/175 (1%)
Strand=Plus/Minus
Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240
|||||| || || | ||| ||||| |||| || |||||||| || || ||||| || ||
Sbjct 2148609 GGGGAAACCCTCGACCTGGCCGTTGGCAATGGCTCGCATCAGGGTGGACTTACCAGCACC 2148550
Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACC-GCGTATTGTTCA 334299
||| || ||||| |||||||| || || ||||| || | ||| | | || |||||
Sbjct 2148549 GTTGGGGCCACAGAGACCGTATCGTCGGCCTCGCTTGAG-TCGAAGCTGGGTTCGGTTCA 2148491
Query 334300 GAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
| ||||| || |||| || |||||||| || ||||| | |||||||||||| ||
Sbjct 2148490 GCAGAATCTTGGCACCGTAAGCCAGAGAGAACTCACAGTTACACAGATCCTCTCC 2148436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879420643350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |