Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2 246 4e-60 seq5 134 2e-26 >seq2 Length=4160336 Score = 246 bits (272), Expect = 4e-60 Identities = 1136/1780 (64%), Gaps = 43/1780 (2%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 ||||||| ||||| || ||| | | ||| ||||||||||| || |||||||| | Sbjct 4112166 TGAACTGGATGGGGGCGGCAGCAGCCATGGTTCGCAGGTAGTACATACCGGTCTTGAGAC 4112107 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 ||| ||||||| | || | ||||| || | | |||| | || || | ||| Sbjct 4112106 CCTTCTTCCAGCCGTAGAAGTGCATGGAAGTGAGCTTGCCCATGGTGGGGTCCTTGATGT 4112047 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 || ||| | ||||| || || |||||| | || || || ||||| || || | Sbjct 4112046 GGATGTTGAGGGACTGGGACTGGTCAATGAAGGGGGATCGGTCGGCAGCCATCTCGATGA 4111987 Query 113745 CATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATAT 113804 |||| || |||||||| || |||| |||| ||| || || | ||||| | Sbjct 4111986 TTCGCTTCTGAGAAATCTCCCACACGGTCTTGTACAGGTCCTTGATCTCCTGGGGGATGT 4111927 Query 113805 CCACGATATTTTGGATGGAGCCAC---CCGCCTTGACCATGAGATCCTTCATATCCTTTG 113861 ||| || || | ||| || | ||| || || | | |||||| || Sbjct 4111926 TGGGGATGTTCTGCACGGATCCGTTGTCGGCC---ACGATTCGGTTCTTCATGGTCTCGT 4111870 Query 113862 ACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCAC 113921 ||| ||||||| || || |||| | || ||||||| ||||||| Sbjct 4111869 TCCACAGACCAACCTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACAATCTGGAACTCAC 4111810 Query 113922 CCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 113980 | || || |||| ||| || || |||| ||||| ||||| |||||||| ||| Sbjct 4111809 CAGCAAGCACTCGTCG-AGAGTAAATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGAAG 4111751 Query 113981 CCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGA 114040 || | || || | ||||| || || |||||||| |||| || || ||| || | Sbjct 4111750 CCGAGAATCTGAGAAGTGGAAGCAGTAGGCATGGGGGCCACCAGCAGCGAGTTTCGCATT 4111691 Query 114041 CCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTC---C 114097 || | | | | || ||||||| ||||||| || || |||| | | Sbjct 4111690 CCAGTCTTCATGATCTTGGCCTTGAGATCGTCCCACTCCCAG---AGCTCGGAGGGAGTC 4111634 Query 114098 CCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCG 114157 | | ||||| |||||||| ||| ||| | |||||| || || |||| || |||||| Sbjct 4111633 ACGTTCCACAGGTCAAACTGCAGGTCACCCTTGGAGGCAGGAGAGCCCTGGAAGGTCTCG 4111574 Query 114158 TATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTC 114217 || | || || | |||| ||| | ||||| | ||| |||| || || ||| Sbjct 4111573 TAAGCACCGTCCTCAAGGGCCATCTCGTAAGAAGCCTCAACGGCACCGTGGTAGATGGTC 4111514 Query 114218 TCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA 114277 || || || | || | ||||||||| ||||| || || | |||||| Sbjct 4111513 TCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACTCGAAGGGCAGTCGGAGGGCC 4111454 Query 114278 ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGAC 114337 || || ||| || ||||| |||||||| || |||| || || |||| ||| || ||| Sbjct 4111453 ATGAAGGTATCAGCCAGACCCTGGACACCCAGAGCAATGGGTCGGTGTCGCATGTTGGAC 4111394 Query 114338 TTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTG 114394 || || ||| || || || | || | || || | || || ||| Sbjct 4111393 TTCTTGGC---CTCAGGGACAGGGTAGTAGTTTCGGTCAATGATGGCGTTGAGGTTTCGC 4111337 Query 114395 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA-ACTGCGA--GTCTCTTC- 114450 | ||||| | || || || ||||| | | | || | | | | ||||| || Sbjct 4111336 ACAATCACCTTGGCAATATCGTGCAGCTTCTTGAAGTCGTAGAAGGAGTTGGTCTCGTCT 4111277 Query 114451 --ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 114508 | ||||| | | || || ||||| || ||||| || || |||| | |||||| | Sbjct 4111276 CGAGTGACAAAGGTGGGCAGAGCGATGGAAGCCAGGTTGCAGACAGCGACCTCATCAGGA 4111217 Query 114509 TCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTT 114568 || |||||| | ||| || ||||| || ||| ||| ||||| |||| ||||||| Sbjct 4111216 GAAGAGTACTCGACAATCTCGCAACACAGGTTGGAAGACTTGATGGTACCCAGGTTCTTT 4111157 Query 114569 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 114628 || || |||||| ||| || || |||||||| |||||| | || | || | ||| || Sbjct 4111156 TGGTTGGACTTTCGGTTGCAGGCGTCCTTGTAGAGCATGAAGGGGTTACCGGACTCGGTC 4111097 Query 114629 TGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGC-TCGCC 114686 ||| | | ||||| | ||| | | || | ||| || | || ||| | | ||| | Sbjct 4111096 TGGCAGTCCAGAATGTGGTACCACAGCTTCTG-GGCAGGGATGGTT-CGTCGACCTCGGC 4111039 Query 114687 CCTCCTCCTCGTACTTTGTGTAGAGG-GCTTCAAACTCTTCACCCACGGCCTCTGAGAGC 114745 |||||| |||||||| ||| || |||| || ||| ||||| | | || ||| Sbjct 4111038 CCTCCTTCTCGTACTGCTCGTACAGCTGCTTGAA-CTCGTCACCGTAGACGTCATCGAGG 4110980 Query 114746 CCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATG 114805 || || || | ||||| | ||||| ||| | | || ||| || |||| |||| Sbjct 4110979 CCAGGGCACTCGTTGGGGCACATGAGAGTCCACTCGGCGTTCTGCTCGACTCGCTCCATG 4110920 Query 114806 AAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCC 114865 || ||||| |||||||||||||| ||| ||||| || || || || | || Sbjct 4110919 AACAGGTCGGGGATCCAGAGAGCCAGGAACAGATCTCGGGCTCGGATCTCCTCCTTACCG 4110860 Query 114866 TGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACC 114925 || || |||| ||| | || || | || || ||||||| || |||||||||| Sbjct 4110859 TGGTTCTTTCGCAGCTCGCAGAACTCGAAGACGTCATCGTGCCAGGGCTCCAGGTACATG 4110800 Query 114926 GCGATTGACCC------CTTACGACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTA 114979 || | | || ||| | | || |||||| || || | || ||| || Sbjct 4110799 GCAAAGGCTCCGGGTCGCTT--GTTG-CCTCCCTGGTCGACGTATCGAGCGGTGTTGTTG 4110743 Query 114980 AATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGAC 115039 | || || ||||| || | |||||| | || || || || || ||| || Sbjct 4110742 TAGACACGCAGCATGGGCACGATACCGTTGGAGGTACCGTTGGTTCCGGCAATGTAGGAT 4110683 Query 115040 TTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGC 115099 |||||| || | |||||| || ||||||||| || || |||| ||||| | Sbjct 4110682 CCGGTGGCTCGGATGTTGTGGATGGACAGACCAATACCTCCAGCGGACTTGGAGATGAGA 4110623 Query 115100 GCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGG 115159 || || | |||| || ||||||| |||||||| ||||| |||| | || |||| Sbjct 4110622 GCACAAGTCTTGAGGGTGTCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACAAGG 4110563 Query 115160 AAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGG 115219 || || |||||| || ||| || || || |||||| | ||||| || | |||||| Sbjct 4110562 AAACACGACGACATCTGGGGCTGGGGGGTTCCTGCGTTGTACAGGGTAGGGGAAGCGTGG 4110503 Query 115220 ATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCC 115278 |||| ||| | || ||||| | | ||||||||| | | | || ||||| || || Sbjct 4110502 GTGAA-GTACTTCTGAGACATGTAGTTGTAGGTCTCAATGGCTCGGGCAATGTTGTCGCC 4110444 Query 115279 GTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGT 115318 ||| ||||||| || || ||||| | ||| | |||||| Sbjct 4110443 GTGGATACCGACAGACACTCGCATGATCATCTGCTGGGGT 4110404 >seq5 Length=2767003 Score = 134 bits (148), Expect = 2e-26 Identities = 348/522 (67%), Gaps = 20/522 (4%) Strand=Plus/Minus Query 125768 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 125827 |||||||||||||||||||| ||||| ||| ||| ||| |||||||| || || || Sbjct 1872719 ACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTCCATGAAGTCGAAG 1872660 Query 125828 GGGTTCTTTGAGTTCCAAA--TTG---TTGGC-ACCCCAATCTGTTTGAGGAGACGATCC 125881 ||||| | ||||| | | ||| ||| | | ||| | || ||||| || Sbjct 1872659 GGGTTGGTGGAGTTGTAGACCTTGGAGTTGCCGAGAGCAACC------AGCAGACGGTCG 1872606 Query 125882 GAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGG 125941 | ||| |||||||||||| |||| || | |||||| |||| || || || Sbjct 1872605 GCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGCAGTCCGCAGGGC 1872546 Query 125942 AGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGTGAATG 126001 || ||||| | |||| ||| ||| || | ||||| || | | | | | | Sbjct 1872545 AGAGCGTCGGTCAGGAACTCCTGCTCGATACCAACGGCCTCGACAATCACGTCCTCGACA 1872486 Query 126002 GTGTCCACCCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCTTGGTG 126060 | | | |||| || | | | || | |||||| |||||| || ||| Sbjct 1872485 ATCTTCTTGGAGGGTCGGTT-CTCGAGGTGCGAGAAGAGCAGACAGGCAAAGTCGGTGTG 1872427 Query 126061 GAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCG 126120 ||||||||||| ||||||||||| || || |||||| || || ||||||||||| || Sbjct 1872426 CAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCTCG 1872367 Query 126121 CTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGC 126180 |||||| | |||||| || | || || || ||||||||||| ||||| || || Sbjct 1872366 CTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAGATGCCCTCGACGGCGGC 1872307 Query 126181 GAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTCAAACCACTTCATCGC 126237 || || | || ||||| |||||| ||||| | || | | |||||| | ||| Sbjct 1872306 AAAGGCGATCAGCCGCTCGCCAAAGG---TCGACTCGTCGTCGGAGATCCACTTGAGCGC 1872250 Query 126238 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 ||| | ||||| |||| ||| || |||| ||||| ||| || Sbjct 1872249 CCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 1872208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353293856280