Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq2 398 8e-106
seq3 176 4e-39
>seq2
Length=4160336
Score = 398 bits (440), Expect = 8e-106
Identities = 1215/1860 (65%), Gaps = 42/1860 (2%)
Strand=Plus/Plus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCT-CAAGATGGATGGCAG 93776
||| | ||||||| |||||| || |||||| | ||||| || | || | | |||
Sbjct 4110333 TACAACTACTTTGGCTTCAAGACCCTGGAGCGAGCCTACCTGCTGCGAG-TCAACGGCGC 4110391
Query 93777 GGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGA 93836
||| |||||||||| || ||| || | ||||| || | |||| || |||||| || |
Sbjct 4110392 TGTTGCCGAGCGACCCCAGCAGATGATCATGCGAGTGTCTGTCGGTATCCACGGCGACAA 4110451
Query 93837 CAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCA 93895
||| ||| | ||| | || || ||||| | ||| | ||| ||
Sbjct 4110452 CATTGCCCGAGCCATTGAGACCTA-CAACTACATGTCTCAGAAGTACTTCACCCACGCTT 4110510
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955
|||| ||||||| |||||| || ||||| ||| |||||||| ||||||||||| | |
Sbjct 4110511 CCCCTACCCTGTACAACGCAGGAACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTTGTCA 4110570
Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015
| |||| |||||||||| ||| || | ||||| ||||||| ||||| |||||
Sbjct 4110571 ACATGAAGGACGACTCCATCGACGGCATCTACGACACCCTCAAGACTTGTGCTCTCATCT 4110630
Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGT--GTCCACGACGTACGTGCCAGGGGTTCCTA 94073
| || | ||| || || || || || || ||||| || | || |||| || |||||
Sbjct 4110631 CCAAGTCCGCTGGAGGTATTGG--TCTGTCCATCCACAACATCCGAGCCACCGGATCCTA 4110688
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
||| ||| ||||| || ||||||||||| |||| || ||||| || |||| ||||||
Sbjct 4110689 CATTGCCGGAACCAACGGTACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTACAACAA 4110748
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || || ||||| |||||||| || | | | || | || || | || ||
Sbjct 4110749 CACCGCTCGATACGTCGACCAGGGAGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCT 4110808
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
||||||||||||| ||||| | ||| ||| ||||||||||||||||| || ||
Sbjct 4110809 GGAGCCCTGGCACGATGACGTCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGTAAGGA 4110868
Query 94254 TCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310
||||| | ||| |||| || ||| ||||||||| | || ||||| || ||| |
Sbjct 4110869 ---GGAGATCCGAGCCCGAGATCTGTTCCTGGCTCTCTGGATCCCCGACCTGTTCATGGA 4110925
Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370
|| |||||| | ||| ||| |||| ||| | || ||||| || || || || ||
Sbjct 4110926 GCGAGTCGAGCAGAACGCCGAGTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTCGA 4110985
Query 94371 CGACGTTTGTGGATCGCGTTTTGAAG-ACTTGTATGCTCGTTACGAATCGCAGGGC--AA 94427
||||| | || | || || ||| | |||| | | ||||| | ||||| |
Sbjct 4110986 TGACGTCTACGG-TGACGAGTTCAAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGAG 4111044
Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487
| | | ||| || ||| |||||||||| | || || ||||| ||| ||
Sbjct 4111045 GTCGACGAA--CCATCCCTGCCCAGAAGCTGTGGTACCACATTCTGGACTGCCAGACCGA 4111102
Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547
| | |||| |||| ||| | | ||||||| | |||| ||||||||||| || |
Sbjct 4111103 GTCCGGTAACCCCTTCATGCTCTACAAGGACGCCTGCAACCGAAAGTCCAACCAAAAGAA 4111162
Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607
||| || |||||| || || ||||| ||||||||||||||| ||||||| ||
Sbjct 4111163 CCTGGGTACCATCAAGTCTTCCAACCTGTGTTGCGAGATTGTCGAGTACTCTTCTCCTGA 4111222
Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGT---GCGAGATGC 94664
||| | ||||| || ||||||| |||||| ||| |||| || || |||||
Sbjct 4111223 TGAGGTCGCTGTCTGCAACCTGGCTTCCATCGCTCTGCCCACCTTTGTCACTCGAGA--- 4111279
Query 94665 CTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAG--GATG 94722
| | || | ||| |||| | ||| | || |||| | | || ||| |||
Sbjct 4111280 CGAGAC--CAACTCCTTC-TACGACTTCAAGAAGCTGCACGATATTGC--CAAGGTGATT 4111334
Query 94723 GTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAAC 94782
|| ||||| ||| | || ||| |||| |||||| ||||| ||||| ||||
Sbjct 4111335 GTGCGAAACCTCAACGCCATCATTGACCGAAACTACTACCCTGTCCCTGAGGCCAAGAAG 4111394
Query 94783 TCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTG 94842
|| ||| || || || ||||| | | || ||||||||| | || || | | ||
Sbjct 4111395 TCCAACATGCGACACCGACCCATTGCTCTGGGTGTCCAGGGTCTGGCTGATACCTTCATG 4111454
Query 94843 ATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAA 94902
| || ||||||| ||| || | || || | | || | | || |||||
Sbjct 4111455 GCCCTCCGACTGCCCTTCGAGTCCGAGGAGGCCAAGAAGCTCAACATCCAGATCTTCGAG 4111514
Query 94903 AGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCA 94962
| ||| || |||| ||| | | || | | ||||| |||||| | |
Sbjct 4111515 ACCATCTACCACGGTGCCGTTGAGGCTTCTTACGAGATGGCCCTTGAGGACGGTG---CT 4111571
Query 94963 CACGAATCGTTCCGCGGATCGCC--CTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGG 95020
|||| | |||| || || || | | | |||| | ||||| ||||| |||
Sbjct 4111572 TACGAGACCTTCCAGGGCTCTCCTGCCTCCA--AGGGTGACCTGCAGTTTGACCTGTGGA 4111629
Query 95021 GTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACG 95080
|||| ||||| | || | || ||||| | ||| || | | || || |
Sbjct 4111630 ACGTGACTCCCTCCGAGCTCTGGGAGTGGGACGATCTCAAGGCCAAGATCATGAAGACTG 4111689
Query 95081 GTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTG 95140
| || |||| ||||||| |||||||||||||| || || ||||| | ||||| || |
Sbjct 4111690 GAATGCGAAACTCGCTGCTGGTGGCCCCCATGCCTACTGCTTCCACTTCTCAGATTCTCG 4111749
Query 95141 GCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCG 95200
|| |||||||| ||||| |||| |||||||||| | ||| | || ||||| || |
Sbjct 4111750 GCTTCAACGAGTGCTTCGAGCCCTACACCTCCAACATTTACTCTCGACGAGTGCTTGCTG 4111809
Query 95201 GGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGG 95260
| || |||| | ||||| || || ||||||| | ||| |||||
Sbjct 4111810 GTGAGTTCCAGATTGTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTTGGTCTGTGGA 4111869
Query 95261 GTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAA 95320
|| | | ||||||| | | | || |||||| ||||| ||||||||||| | |
Sbjct 4111870 ACGAGACCATGAAGAACCGAATCGTGGCCGACAACGGATCCGTGCAGAACATCCCCAACA 4111929
Query 95321 TACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG-CGCGTGATA 95379
| || |||| ||||||| || |||||||||||||||||||| | ||| ||| ||
Sbjct 4111930 TCCCCCAGGAGATCAAGGACCTGTACAAGACCGTGTGGGAGATTTCTCAGAAGCG-AATC 4111988
Query 95380 CTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNNNNN 95439
|||| || |||| ||| |||||||| ||||
Sbjct 4111989 ATCGAGATGGCTGCCGACCGATCCCCCTTCATTGACCAGTCCCAGTCCCTCAACATCCAC 4112048
Query 95440 ATGGCCGAGCCCAGTCGCGGAAAAATAACGTCCATGTTGTTCTACGGGTGGAGAAAGGGT 95499
|| || |||| || || | || |||||| |||||||| |||| ||||||
Sbjct 4112049 ATCAAGGACCCCACCATGGGCAAGCTCACTTCCATGCACTTCTACGGCTGGAAGAAGGGT 4112108
Query 95500 CTCAAGACCGGTATGTATTATTTGCGAACCAGGCCAAAGGCGGACTCCATACAGTTCGCC 95559
||||||||||||||||| || ||||||||| | | || | | |||| |||||| ||
Sbjct 4112109 CTCAAGACCGGTATGTACTACCTGCGAACCATGGCTGCTGCCGCCCCCATCCAGTTCACC 4112168
>seq3
Length=2943663
Score = 176 bits (194), Expect = 4e-39
Identities = 1053/1663 (63%), Gaps = 38/1663 (2%)
Strand=Plus/Minus
Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGAT--GGATGGCAGGGTTT 93781
||||||| |||||| || ||||| ||||||||| | || |||| ||| || || |
Sbjct 1832795 TACTTTGGCTTCAAGACGCTGGAAAAGTCGTACTTGCT-AAGAACCGGA-GGAAGTATAG 1832738
Query 93782 CCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGC 93841
|| || || || || |||| |||||||| || | ||||| || || |||| ||
Sbjct 1832737 TTGAACGTCCTCAACATATGCTCATGCGCGTGGCTCTGGGGATCCATGGAGACGATATCG 1832678
Query 93842 CGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGA 93901
| || || || | | || | || | || | | || || | || |
Sbjct 1832677 CCAAGGTGCTGGAAACGTACACGGCTCTGTCGCTCAGAAAATTCACACACGCTTCTCCCA 1832618
Query 93902 CCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACA 93961
| || ||||| || || || || | ||| |||| || ||||| ||| || | |
Sbjct 1832617 CGCTTTTCAATGCCGGTACTCCCCAGGGACAACTGTCGTCCTGTTTTCTGGTGGCTATGG 1832558
Query 93962 AGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAAT 94021
||||||||||| |||||| | ||| | ||||||| |||||| ||||| |||
Sbjct 1832557 CATCCGACTCCATCGACGGAATCTACGATACCCTCAAGACGTGTGCGCAAATCTCGAAAA 1832498
Query 94022 ACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC-CGC 94080
|| || || ||||| | | | || | | | |||| |||| | ||| |
Sbjct 1832497 CGGCTGGAGGTATCGGTCTGCATATTCATAATATCAGGGCCAAGGGTGCTATCATTACTG 1832438
Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140
||| ||| || | |||| ||| | || || |||||| |||| ||||||||| | ||
Sbjct 1832437 GGTCTCAA-GGAAGGTCCAGTGGCATTGTTCCCATGCTCAGGGTGTTCAACAACACCGCA 1832379
Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200
|| || || ||||||||||| | | | || | || || ||||||| ||||||
Sbjct 1832378 CGGTATGTCGACCAGGGTGGAAACAAGCGTCCCGGAGCGTTTGCCATCTATCTGGAGCCC 1832319
Query 94201 TGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAG 94260
||||| || || | | | |||| | ||||||| || |||||||| || | |
Sbjct 1832318 TGGCATGCCGATATTCTCGATTTCCTGAACCTGCGGAAAAACCACGGAGCAGAGGAGAAC 1832259
Query 94261 AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAG 94320
|| || |||||||| |||||||| | |||||||| ||||| || ||||| || |||||
Sbjct 1832258 AGAGCAAGAGACCTGTTCTACGCATTGTGGGTGCCGGACCTGTTCATGAAGCGGGTCGAA 1832199
Query 94321 AAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCC-GGACTGTCCGACGTTTG 94379
| | | ||| | || ||| |||| ||| | ||| || ||| ||||| ||
Sbjct 1832198 AGAGGCGAAAAGTGGTCCTTGTTCTGT-CCAAAGAAGGCCCCTGGGCTGGAAGACGTGTG 1832140
Query 94380 TGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGT 94439
||| | ||||| | || | ||||| ||||| | || |
Sbjct 1832139 GGGACCTGAGTTTGAGCAGAAATACGAGGAGTACGAGAAAAAGGGCTTGTTCAACGCGCA 1832080
Query 94440 TATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACG-TACAGGTGGAGACGGGTACGC 94498
|| | || | |||||| | |||| | ||| ||| | || || || |
Sbjct 1832079 GATCAACGCGCAGGAGCTGTTCAAGGCGATCCT-CACGAGTCAGATCGAAACCGGAGGAC 1832021
Query 94499 CCTACATCTTGTTCAAGGAC-TCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTG 94557
| | ||| | | ||||||| ||| |||||| ||||||||||||||| |||| ||
Sbjct 1832020 CGTTCATGCTCTACAAGGACAGCTG-CAACGCAAAGTCCAACCAGCAGAACCTGGGCACC 1831962
Query 94558 ATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCT 94617
|||||| |||||||||||||| || || ||| |||| | || || || ||| | ||
Sbjct 1831961 ATCAAGTCGTCGAATCTGTGCACGGAAATCGTCCAGTACTCGTCACCCGAAGAGGTGGCG 1831902
Query 94618 GTGTGTAACCTGGGCTCCATCAACCTGTCC--ACTT--TCGTGC-----GAGA-TGCCTA 94667
||||| ||||||| || | | | | || | || ||| || |||| | | |
Sbjct 1831901 GTGTGCAACCTGGCGTCTGT-AGCTTTGCCTGAGTTTGTCGAGCTCAAGGAGACAGACAA 1831843
Query 94668 CACGTCTACTGCTTCGTTCGA-TCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCT 94726
|| | ||| || | | | | |||| || || || || | ||| |
Sbjct 1831842 GACCACCTCTGGCTCCTACAACTTTGGA-GAACTGCATAAAACCGTCAAACACATGACCC 1831784
Query 94727 TGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAA 94786
||||| ||||| | ||||| |||| |||||||||| |||||| || | || |
Sbjct 1831783 GCAACCTCAACAGCATCATCGAGGCCAACTGCTACCCCGTCAAGGAGGCAGAAACGTCCA 1831724
Query 94787 ACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGA 94846
|| ||||| || || | | | || ||||| || | || |||| | | |||
Sbjct 1831723 ACAAACGTCATCGTCCGATTGCCGTGGGTGTCCAAGGACTGGCAGACGTGTTTATGAAAC 1831664
Query 94847 TGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCA 94906
|||| ||||||||||| | || || || | | || || ||| ||||| | ||
Sbjct 1831663 TGCGCATGCCCTACGACAGTCCTGAGGCTGCCGAACTCAACGTGCTCATCTTCGAGACCA 1831604
Query 94907 TTTATTACGGGGCCATGAAACAATCCGTCCACTTGGC--CAGATCGGACGGCGGGCCACA 94964
| || ||| ||| || ||| || | |||| |||||| | || || |
Sbjct 1831603 TCTACCACGCTGCCTGCGAAGCGTCCATCGAGCTGGCAGCAGATCTG-----GGACCGTA 1831549
Query 94965 CGAATCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023
|| ||| | || || | ||| | | |||| ||||||| || ||||||
Sbjct 1831548 TGAGTCG-TACGAGGGCAGTCCTGCAAGCAAGGGTCAGCTTCAGTTTGATCTCTGGAACA 1831490
Query 95024 TGAAGCCCTCGGGTCTGTACGACTGG--GAAGCTCTACGCGCTGATGTTATCAAACACGG 95081
|| ||||||| ||||| |||||| | |||| | || | || ||| |||||
Sbjct 1831489 AGACTCCCTCGGATCTGTGGGACTGGTCGCTGCTCAA--GGCCAACCTTGCCAAGCACGG 1831432
Query 95082 TGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGG 95141
| || ||| ||||||| ||||| || ||||| ||||| |||||| | ||||| || ||
Sbjct 1831431 TATGCGCAACTCGCTGCTGGTGGCTCCTATGCCTACGGCTTCCACGTCTCAGATTCTCGG 1831372
Query 95142 CAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGG 95201
| ||||||||| ||||| || | |||||||||| | ||| | || || | || ||
Sbjct 1831371 CCACAACGAGTGTTTCGAGCCATACACCTCCAACATCTACCTTCGTCGAGTTCAAGCAGG 1831312
Query 95202 GGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGG 95261
|| |||| |||| ||||| | || | ||| || | ||||| |||||
Sbjct 1831311 CGAGTTCCTCGTCGTCAACCACTGGCTGATGAAGGATCTCATCAAGCTGGGCATGTGGAA 1831252
Query 95262 TGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAAT 95321
|| || | || |||| | | | | || ||||||||| ||||| |||| | || ||
Sbjct 1831251 CGAGCAGATGAAAAACCGAATCATCCACGACAACGGCTCGATCCAGTCCATCACCCAGAT 1831192
Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATC 95364
|| || ||||| ||| | ||| |||| ||||| |||
Sbjct 1831191 TCCCGAAAACATCCGGGCCGTGTACCGAACCGCCTGGGAAATC 1831149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722946454360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |