Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 398 8e-106 seq3 176 4e-39 >seq2 Length=4160336 Score = 398 bits (440), Expect = 8e-106 Identities = 1215/1860 (65%), Gaps = 42/1860 (2%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCT-CAAGATGGATGGCAG 93776 ||| | ||||||| |||||| || |||||| | ||||| || | || | | ||| Sbjct 4110333 TACAACTACTTTGGCTTCAAGACCCTGGAGCGAGCCTACCTGCTGCGAG-TCAACGGCGC 4110391 Query 93777 GGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGA 93836 ||| |||||||||| || ||| || | ||||| || | |||| || |||||| || | Sbjct 4110392 TGTTGCCGAGCGACCCCAGCAGATGATCATGCGAGTGTCTGTCGGTATCCACGGCGACAA 4110451 Query 93837 CAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCA 93895 ||| ||| | ||| | || || ||||| | ||| | ||| || Sbjct 4110452 CATTGCCCGAGCCATTGAGACCTA-CAACTACATGTCTCAGAAGTACTTCACCCACGCTT 4110510 Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| ||||||| |||||| || ||||| ||| |||||||| ||||||||||| | | Sbjct 4110511 CCCCTACCCTGTACAACGCAGGAACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTTGTCA 4110570 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | |||| |||||||||| ||| || | ||||| ||||||| ||||| ||||| Sbjct 4110571 ACATGAAGGACGACTCCATCGACGGCATCTACGACACCCTCAAGACTTGTGCTCTCATCT 4110630 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGT--GTCCACGACGTACGTGCCAGGGGTTCCTA 94073 | || | ||| || || || || || || ||||| || | || |||| || ||||| Sbjct 4110631 CCAAGTCCGCTGGAGGTATTGG--TCTGTCCATCCACAACATCCGAGCCACCGGATCCTA 4110688 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| ||| ||||| || ||||||||||| |||| || ||||| || |||| |||||| Sbjct 4110689 CATTGCCGGAACCAACGGTACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTACAACAA 4110748 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || || ||||| |||||||| || | | | || | || || | || || Sbjct 4110749 CACCGCTCGATACGTCGACCAGGGAGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCT 4110808 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||||||||||| ||||| | ||| ||| ||||||||||||||||| || || Sbjct 4110809 GGAGCCCTGGCACGATGACGTCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGTAAGGA 4110868 Query 94254 TCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 ||||| | ||| |||| || ||| ||||||||| | || ||||| || ||| | Sbjct 4110869 ---GGAGATCCGAGCCCGAGATCTGTTCCTGGCTCTCTGGATCCCCGACCTGTTCATGGA 4110925 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 || |||||| | ||| ||| |||| ||| | || ||||| || || || || || Sbjct 4110926 GCGAGTCGAGCAGAACGCCGAGTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTCGA 4110985 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAG-ACTTGTATGCTCGTTACGAATCGCAGGGC--AA 94427 ||||| | || | || || ||| | |||| | | ||||| | ||||| | Sbjct 4110986 TGACGTCTACGG-TGACGAGTTCAAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGAG 4111044 Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 | | | ||| || ||| |||||||||| | || || ||||| ||| || Sbjct 4111045 GTCGACGAA--CCATCCCTGCCCAGAAGCTGTGGTACCACATTCTGGACTGCCAGACCGA 4111102 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 | | |||| |||| ||| | | ||||||| | |||| ||||||||||| || | Sbjct 4111103 GTCCGGTAACCCCTTCATGCTCTACAAGGACGCCTGCAACCGAAAGTCCAACCAAAAGAA 4111162 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 ||| || |||||| || || ||||| ||||||||||||||| ||||||| || Sbjct 4111163 CCTGGGTACCATCAAGTCTTCCAACCTGTGTTGCGAGATTGTCGAGTACTCTTCTCCTGA 4111222 Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGT---GCGAGATGC 94664 ||| | ||||| || ||||||| |||||| ||| |||| || || ||||| Sbjct 4111223 TGAGGTCGCTGTCTGCAACCTGGCTTCCATCGCTCTGCCCACCTTTGTCACTCGAGA--- 4111279 Query 94665 CTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAG--GATG 94722 | | || | ||| |||| | ||| | || |||| | | || ||| ||| Sbjct 4111280 CGAGAC--CAACTCCTTC-TACGACTTCAAGAAGCTGCACGATATTGC--CAAGGTGATT 4111334 Query 94723 GTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAAC 94782 || ||||| ||| | || ||| |||| |||||| ||||| ||||| |||| Sbjct 4111335 GTGCGAAACCTCAACGCCATCATTGACCGAAACTACTACCCTGTCCCTGAGGCCAAGAAG 4111394 Query 94783 TCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTG 94842 || ||| || || || ||||| | | || ||||||||| | || || | | || Sbjct 4111395 TCCAACATGCGACACCGACCCATTGCTCTGGGTGTCCAGGGTCTGGCTGATACCTTCATG 4111454 Query 94843 ATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAA 94902 | || ||||||| ||| || | || || | | || | | || ||||| Sbjct 4111455 GCCCTCCGACTGCCCTTCGAGTCCGAGGAGGCCAAGAAGCTCAACATCCAGATCTTCGAG 4111514 Query 94903 AGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCA 94962 | ||| || |||| ||| | | || | | ||||| |||||| | | Sbjct 4111515 ACCATCTACCACGGTGCCGTTGAGGCTTCTTACGAGATGGCCCTTGAGGACGGTG---CT 4111571 Query 94963 CACGAATCGTTCCGCGGATCGCC--CTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGG 95020 |||| | |||| || || || | | | |||| | ||||| ||||| ||| Sbjct 4111572 TACGAGACCTTCCAGGGCTCTCCTGCCTCCA--AGGGTGACCTGCAGTTTGACCTGTGGA 4111629 Query 95021 GTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACG 95080 |||| ||||| | || | || ||||| | ||| || | | || || | Sbjct 4111630 ACGTGACTCCCTCCGAGCTCTGGGAGTGGGACGATCTCAAGGCCAAGATCATGAAGACTG 4111689 Query 95081 GTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTG 95140 | || |||| ||||||| |||||||||||||| || || ||||| | ||||| || | Sbjct 4111690 GAATGCGAAACTCGCTGCTGGTGGCCCCCATGCCTACTGCTTCCACTTCTCAGATTCTCG 4111749 Query 95141 GCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCG 95200 || |||||||| ||||| |||| |||||||||| | ||| | || ||||| || | Sbjct 4111750 GCTTCAACGAGTGCTTCGAGCCCTACACCTCCAACATTTACTCTCGACGAGTGCTTGCTG 4111809 Query 95201 GGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGG 95260 | || |||| | ||||| || || ||||||| | ||| ||||| Sbjct 4111810 GTGAGTTCCAGATTGTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTTGGTCTGTGGA 4111869 Query 95261 GTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAA 95320 || | | ||||||| | | | || |||||| ||||| ||||||||||| | | Sbjct 4111870 ACGAGACCATGAAGAACCGAATCGTGGCCGACAACGGATCCGTGCAGAACATCCCCAACA 4111929 Query 95321 TACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG-CGCGTGATA 95379 | || |||| ||||||| || |||||||||||||||||||| | ||| ||| || Sbjct 4111930 TCCCCCAGGAGATCAAGGACCTGTACAAGACCGTGTGGGAGATTTCTCAGAAGCG-AATC 4111988 Query 95380 CTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNNNNN 95439 |||| || |||| ||| |||||||| |||| Sbjct 4111989 ATCGAGATGGCTGCCGACCGATCCCCCTTCATTGACCAGTCCCAGTCCCTCAACATCCAC 4112048 Query 95440 ATGGCCGAGCCCAGTCGCGGAAAAATAACGTCCATGTTGTTCTACGGGTGGAGAAAGGGT 95499 || || |||| || || | || |||||| |||||||| |||| |||||| Sbjct 4112049 ATCAAGGACCCCACCATGGGCAAGCTCACTTCCATGCACTTCTACGGCTGGAAGAAGGGT 4112108 Query 95500 CTCAAGACCGGTATGTATTATTTGCGAACCAGGCCAAAGGCGGACTCCATACAGTTCGCC 95559 ||||||||||||||||| || ||||||||| | | || | | |||| |||||| || Sbjct 4112109 CTCAAGACCGGTATGTACTACCTGCGAACCATGGCTGCTGCCGCCCCCATCCAGTTCACC 4112168 >seq3 Length=2943663 Score = 176 bits (194), Expect = 4e-39 Identities = 1053/1663 (63%), Gaps = 38/1663 (2%) Strand=Plus/Minus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGAT--GGATGGCAGGGTTT 93781 ||||||| |||||| || ||||| ||||||||| | || |||| ||| || || | Sbjct 1832795 TACTTTGGCTTCAAGACGCTGGAAAAGTCGTACTTGCT-AAGAACCGGA-GGAAGTATAG 1832738 Query 93782 CCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGC 93841 || || || || || |||| |||||||| || | ||||| || || |||| || Sbjct 1832737 TTGAACGTCCTCAACATATGCTCATGCGCGTGGCTCTGGGGATCCATGGAGACGATATCG 1832678 Query 93842 CGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGA 93901 | || || || | | || | || | || | | || || | || | Sbjct 1832677 CCAAGGTGCTGGAAACGTACACGGCTCTGTCGCTCAGAAAATTCACACACGCTTCTCCCA 1832618 Query 93902 CCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACA 93961 | || ||||| || || || || | ||| |||| || ||||| ||| || | | Sbjct 1832617 CGCTTTTCAATGCCGGTACTCCCCAGGGACAACTGTCGTCCTGTTTTCTGGTGGCTATGG 1832558 Query 93962 AGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAAT 94021 ||||||||||| |||||| | ||| | ||||||| |||||| ||||| ||| Sbjct 1832557 CATCCGACTCCATCGACGGAATCTACGATACCCTCAAGACGTGTGCGCAAATCTCGAAAA 1832498 Query 94022 ACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC-CGC 94080 || || || ||||| | | | || | | | |||| |||| | ||| | Sbjct 1832497 CGGCTGGAGGTATCGGTCTGCATATTCATAATATCAGGGCCAAGGGTGCTATCATTACTG 1832438 Query 94081 GGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCG 94140 ||| ||| || | |||| ||| | || || |||||| |||| ||||||||| | || Sbjct 1832437 GGTCTCAA-GGAAGGTCCAGTGGCATTGTTCCCATGCTCAGGGTGTTCAACAACACCGCA 1832379 Query 94141 CGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCC 94200 || || || ||||||||||| | | | || | || || ||||||| |||||| Sbjct 1832378 CGGTATGTCGACCAGGGTGGAAACAAGCGTCCCGGAGCGTTTGCCATCTATCTGGAGCCC 1832319 Query 94201 TGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAG 94260 ||||| || || | | | |||| | ||||||| || |||||||| || | | Sbjct 1832318 TGGCATGCCGATATTCTCGATTTCCTGAACCTGCGGAAAAACCACGGAGCAGAGGAGAAC 1832259 Query 94261 AGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAG 94320 || || |||||||| |||||||| | |||||||| ||||| || ||||| || ||||| Sbjct 1832258 AGAGCAAGAGACCTGTTCTACGCATTGTGGGTGCCGGACCTGTTCATGAAGCGGGTCGAA 1832199 Query 94321 AAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCC-GGACTGTCCGACGTTTG 94379 | | | ||| | || ||| |||| ||| | ||| || ||| ||||| || Sbjct 1832198 AGAGGCGAAAAGTGGTCCTTGTTCTGT-CCAAAGAAGGCCCCTGGGCTGGAAGACGTGTG 1832140 Query 94380 TGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGT 94439 ||| | ||||| | || | ||||| ||||| | || | Sbjct 1832139 GGGACCTGAGTTTGAGCAGAAATACGAGGAGTACGAGAAAAAGGGCTTGTTCAACGCGCA 1832080 Query 94440 TATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACG-TACAGGTGGAGACGGGTACGC 94498 || | || | |||||| | |||| | ||| ||| | || || || | Sbjct 1832079 GATCAACGCGCAGGAGCTGTTCAAGGCGATCCT-CACGAGTCAGATCGAAACCGGAGGAC 1832021 Query 94499 CCTACATCTTGTTCAAGGAC-TCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTG 94557 | | ||| | | ||||||| ||| |||||| ||||||||||||||| |||| || Sbjct 1832020 CGTTCATGCTCTACAAGGACAGCTG-CAACGCAAAGTCCAACCAGCAGAACCTGGGCACC 1831962 Query 94558 ATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCT 94617 |||||| |||||||||||||| || || ||| |||| | || || || ||| | || Sbjct 1831961 ATCAAGTCGTCGAATCTGTGCACGGAAATCGTCCAGTACTCGTCACCCGAAGAGGTGGCG 1831902 Query 94618 GTGTGTAACCTGGGCTCCATCAACCTGTCC--ACTT--TCGTGC-----GAGA-TGCCTA 94667 ||||| ||||||| || | | | | || | || ||| || |||| | | | Sbjct 1831901 GTGTGCAACCTGGCGTCTGT-AGCTTTGCCTGAGTTTGTCGAGCTCAAGGAGACAGACAA 1831843 Query 94668 CACGTCTACTGCTTCGTTCGA-TCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCT 94726 || | ||| || | | | | |||| || || || || | ||| | Sbjct 1831842 GACCACCTCTGGCTCCTACAACTTTGGA-GAACTGCATAAAACCGTCAAACACATGACCC 1831784 Query 94727 TGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAA 94786 ||||| ||||| | ||||| |||| |||||||||| |||||| || | || | Sbjct 1831783 GCAACCTCAACAGCATCATCGAGGCCAACTGCTACCCCGTCAAGGAGGCAGAAACGTCCA 1831724 Query 94787 ACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGA 94846 || ||||| || || | | | || ||||| || | || |||| | | ||| Sbjct 1831723 ACAAACGTCATCGTCCGATTGCCGTGGGTGTCCAAGGACTGGCAGACGTGTTTATGAAAC 1831664 Query 94847 TGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCA 94906 |||| ||||||||||| | || || || | | || || ||| ||||| | || Sbjct 1831663 TGCGCATGCCCTACGACAGTCCTGAGGCTGCCGAACTCAACGTGCTCATCTTCGAGACCA 1831604 Query 94907 TTTATTACGGGGCCATGAAACAATCCGTCCACTTGGC--CAGATCGGACGGCGGGCCACA 94964 | || ||| ||| || ||| || | |||| |||||| | || || | Sbjct 1831603 TCTACCACGCTGCCTGCGAAGCGTCCATCGAGCTGGCAGCAGATCTG-----GGACCGTA 1831549 Query 94965 CGAATCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGTTCGACCTCTGGGGTG 95023 || ||| | || || | ||| | | |||| ||||||| || |||||| Sbjct 1831548 TGAGTCG-TACGAGGGCAGTCCTGCAAGCAAGGGTCAGCTTCAGTTTGATCTCTGGAACA 1831490 Query 95024 TGAAGCCCTCGGGTCTGTACGACTGG--GAAGCTCTACGCGCTGATGTTATCAAACACGG 95081 || ||||||| ||||| |||||| | |||| | || | || ||| ||||| Sbjct 1831489 AGACTCCCTCGGATCTGTGGGACTGGTCGCTGCTCAA--GGCCAACCTTGCCAAGCACGG 1831432 Query 95082 TGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGG 95141 | || ||| ||||||| ||||| || ||||| ||||| |||||| | ||||| || || Sbjct 1831431 TATGCGCAACTCGCTGCTGGTGGCTCCTATGCCTACGGCTTCCACGTCTCAGATTCTCGG 1831372 Query 95142 CAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGG 95201 | ||||||||| ||||| || | |||||||||| | ||| | || || | || || Sbjct 1831371 CCACAACGAGTGTTTCGAGCCATACACCTCCAACATCTACCTTCGTCGAGTTCAAGCAGG 1831312 Query 95202 GGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGG 95261 || |||| |||| ||||| | || | ||| || | ||||| ||||| Sbjct 1831311 CGAGTTCCTCGTCGTCAACCACTGGCTGATGAAGGATCTCATCAAGCTGGGCATGTGGAA 1831252 Query 95262 TGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAAT 95321 || || | || |||| | | | | || ||||||||| ||||| |||| | || || Sbjct 1831251 CGAGCAGATGAAAAACCGAATCATCCACGACAACGGCTCGATCCAGTCCATCACCCAGAT 1831192 Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATC 95364 || || ||||| ||| | ||| |||| ||||| ||| Sbjct 1831191 TCCCGAAAACATCCGGGCCGTGTACCGAACCGCCTGGGAAATC 1831149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722946454360