Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq2 223 4e-53
seq5 131 2e-25
>seq2
Length=4160336
Score = 223 bits (246), Expect = 4e-53
Identities = 1132/1781 (64%), Gaps = 45/1781 (3%)
Strand=Plus/Minus
Query 115526 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 115585
||||||| ||||| || ||| | | ||| ||||||||||| || |||||||| |
Sbjct 4112166 TGAACTGGATGGGGGCGGCAGCAGCCATGGTTCGCAGGTAGTACATACCGGTCTTGAGAC 4112107
Query 115586 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 115645
||| ||||||| | || | ||||| || | | |||| | || || | |||
Sbjct 4112106 CCTTCTTCCAGCCGTAGAAGTGCATGGAAGTGAGCTTGCCCATGGTGGGGTCCTTGATGT 4112047
Query 115646 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 115705
|| ||| | ||||| || || |||||| | || || || ||||| || || |
Sbjct 4112046 GGATGTTGAGGGACTGGGACTGGTCAATGAAGGGGGATCGGTCGGCAGCCATCTCGATGA 4111987
Query 115706 CATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATAT 115765
|||| || |||||||| || |||| |||| ||| || || | ||||| |
Sbjct 4111986 TTCGCTTCTGAGAAATCTCCCACACGGTCTTGTACAGGTCCTTGATCTCCTGGGGGATGT 4111927
Query 115766 CCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGA---GATCCTTCATATCCTTTG 115822
||| || || | || || || | | ||| || | | |||||| ||
Sbjct 4111926 TGGGGATGTTCTGCACGGATCCGT-TGTC--GGCCACGATTCGGTTCTTCATGGTCTCGT 4111870
Query 115823 ACCAGAGACCAATCTTCTTGAGATCCTCCA----CGAGGTGCTTATTGACAACAACAAAC 115878
||| ||||||| || || |||| | | ||| | ||||||| |||
Sbjct 4111869 TCCACAGACCAACCTCAACCAGGTCCTTGAGCAGCCAGGGG----TTGACAATCTGGAAC 4111814
Query 115879 TCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATT 115937
||||| || || |||| ||| || ||||||| ||||| ||||| |||||||| ||
Sbjct 4111813 TCACCAGCAAGCACTCGTCG-AGAGTAAATGTTGGAGGTGTAGGGCTCGAAGCACTCGTT 4111755
Query 115938 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCG 115997
| || | || || | ||||| || || |||||||| |||| || || ||| ||
Sbjct 4111754 GAAGCCGAGAATCTGAGAAGTGGAAGCAGTAGGCATGGGGGCCACCAGCAGCGAGTTTCG 4111695
Query 115998 GAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTC 116057
| || | | | || ||||||| ||||||| || || |||| |
Sbjct 4111694 CATTCCAGTCTTCATGATCTTGGCCTTGAGATCGTCCCACTCCCAG---AGCTCGGAGGG 4111638
Query 116058 ---CCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 116114
| | | ||||| |||||||| ||| ||| | ||| || || || |||| || ||
Sbjct 4111637 AGTCACGTTCCACAGGTCAAACTGCAGGTCACCCTTGGAGGCAGGAGAGCCCTGGAAGGT 4111578
Query 116115 CTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACAT 116174
||| || | || || | |||| ||| | ||||| | ||| |||| || ||
Sbjct 4111577 CTCGTAAGCACCGTCCTCAAGGGCCATCTCGTAAGAAGCCTCAACGGCACCGTGGTAGAT 4111518
Query 116175 TGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCA 116234
||||| || || | || | ||||||||| ||||| || || | || |||
Sbjct 4111517 GGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACTCGAAGGGCAGTCGGAG 4111458
Query 116235 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 116294
|| || ||| || ||||| |||||||| || |||| || || |||| ||| ||
Sbjct 4111457 GGCCATGAAGGTATCAGCCAGACCCTGGACACCCAGAGCAATGGGTCGGTGTCGCATGTT 4111398
Query 116295 AGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 116351
||||| || ||| || || || | || | || || | || || ||
Sbjct 4111397 GGACTTCTTGGC---CTCAGGGACAGGGTAGTAGTTTCGGTCAATGATGGCGTTGAGGTT 4111341
Query 116352 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA-ACTGCGA--GTCTC 116408
| | ||||| | || || || ||||| | | | || | | | | |||||
Sbjct 4111340 TCGCACAATCACCTTGGCAATATCGTGCAGCTTCTTGAAGTCGTAGAAGGAGTTGGTCTC 4111281
Query 116409 TTC---ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC 116465
|| | ||||| | | || || ||||| || ||||| || || |||| | ||||||
Sbjct 4111280 GTCTCGAGTGACAAAGGTGGGCAGAGCGATGGAAGCCAGGTTGCAGACAGCGACCTCATC 4111221
Query 116466 CTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTT 116525
| || |||||| | ||| || ||||| || ||| ||| ||||| |||| |||
Sbjct 4111220 AGGAGAAGAGTACTCGACAATCTCGCAACACAGGTTGGAAGACTTGATGGTACCCAGGTT 4111161
Query 116526 CTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTC 116585
|||||| || |||||| ||| || || |||||||||||||| | || | || | |||
Sbjct 4111160 CTTTTGGTTGGACTTTCGGTTGCAGGCGTCCTTGTAGAGCATGAAGGGGTTACCGGACTC 4111101
Query 116586 CGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTG-GCT 116643
|| ||| | | ||||| | ||| | | || | ||| || | || ||| | ||
Sbjct 4111100 GGTCTGGCAGTCCAGAATGTGGTACCACAGCTTCTG-GGCAGGGATGGT-TCGTCGACCT 4111043
Query 116644 CGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAG 116703
|| ||||||| |||||||| ||| || || ||||| ||||| | || |
Sbjct 4111042 CGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTTGAACTCGTCACCGTAGACGTCATCG 4110983
Query 116704 AGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTC 116763
|| || || || | || || | ||||| ||| | | || ||| || |||| |
Sbjct 4110982 AGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCACTCGGCGTTCTGCTCGACTCGCTCC 4110923
Query 116764 ATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCC 116823
||||| ||||| ||||||||||| ||| ||| ||||| || || || || |
Sbjct 4110922 ATGAACAGGTCGGGGATCCAGAGAGCCAGGAACAGATCTCGGGCTCGGATCTCCTCCTTA 4110863
Query 116824 CCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTAC 116883
|| || || |||| ||| | || || | || || ||||||| || |||||||||
Sbjct 4110862 CCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGACGTCATCGTGCCAGGGCTCCAGGTAC 4110803
Query 116884 ACCGCGATTGACCC--CTTGC--GACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTT 116939
| || | | || | || | | || |||||| || || | || || |||
Sbjct 4110802 ATGGCAAAGGCTCCGGGTCGCTTGTTG-CCTCCCTGGTCGACGTATCGAGCGGTGTTGTT 4110744
Query 116940 AAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGA 116999
| || || ||||| || | |||||| | || || || || || ||| ||
Sbjct 4110743 GTAGACACGCAGCATGGGCACGATACCGTTGGAGGTACCGTTGGTTCCGGCAATGTAGGA 4110684
Query 117000 CTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 117059
| |||||| || | ||||||| || ||||||||| || || |||| ||||| |
Sbjct 4110683 TCCGGTGGCTCGGATGTTGTGGATGGACAGACCAATACCTCCAGCGGACTTGGAGATGAG 4110624
Query 117060 TGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAG 117119
|| || | |||| || ||||||| || ||||| ||||| |||| | || ||
Sbjct 4110623 AGCACAAGTCTTGAGGGTGTCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACAAG 4110564
Query 117120 GAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 117179
||| || |||||| || ||| || || || |||||| | ||||| || | |||||
Sbjct 4110563 GAAACACGACGACATCTGGGGCTGGGGGGTTCCTGCGTTGTACAGGGTAGGGGAAGCGTG 4110504
Query 117180 GATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCC 117238
| |||| ||| | || ||||| | | ||||||||| | | | || ||||| || |
Sbjct 4110503 GGTGAA-GTACTTCTGAGACATGTAGTTGTAGGTCTCAATGGCTCGGGCAATGTTGTCGC 4110445
Query 117239 CGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGT 117279
|||| ||||||| || || ||||| | ||| | ||||||
Sbjct 4110444 CGTGGATACCGACAGACACTCGCATGATCATCTGCTGGGGT 4110404
>seq5
Length=2767003
Score = 131 bits (144), Expect = 2e-25
Identities = 171/234 (73%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| ||||||||||| ||||||||||| || || |||||| || ||
Sbjct 1872440 GCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCG 1872381
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||||||||| |||||||| | |||||| || | || ||||| |||||||||||
Sbjct 1872380 GGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAGATG 1872321
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-AA 127698
||||| || || || || | || |||||| |||||| || | | || | |
Sbjct 1872320 CCCTCGACGGCGGCAAAGGCGATCAGCCGCTCGCCAAAGG-TCGACTCGTCGTCGGAGAT 1872262
Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752
|||||| | |||||| | ||||| |||| ||| || |||| ||||| ||| ||
Sbjct 1872261 CCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 1872208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506885577560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |