Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq5 399 2e-106
seq2 123 2e-23
seq1 120 3e-22
>seq5
Length=2767003
Score = 399 bits (442), Expect = 2e-106
Identities = 652/928 (70%), Gaps = 17/928 (2%)
Strand=Plus/Minus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| ||||| || || || ||| |||| ||||| || || || || || || |
Sbjct 1872747 CATGACGCCGGCCTTCTGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGC 1872688
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGG---TGCC 132707
|| || ||| | ||| || || |||||||||| | ||||||| ||||| ||||
Sbjct 1872687 CAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTGGAGTTGCC 1872628
Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGC 132766
|| || | || ||||| | |||||| || ||||| ||||| || ||||| | || ||
Sbjct 1872627 GAG-AG--CAACCAGCAGACGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGC 1872571
Query 132767 AATTAAGTCCCAGCAGAC-GCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCG 132825
|| | ||| ||||| | ||| ||||| || ||||| || || |||||||| |
Sbjct 1872570 G-TTCATTCCGAGCAGTCCGCAG-GGCAGAGCGTCGGTCAGGAACTCCTGCTCGATACCA 1872513
Query 132826 ACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTG 132885
|| || ||| | | ||| || | | | || || | | | | ||| |
Sbjct 1872512 ACGGCCTCGACAATCACGTCCTCGACAATCTTCTTGGAGGGTCGGTTCTCGAGGTGCGAG 1872453
Query 132886 AACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTG 132945
|| | || || ||||||||| |||| |||||||| | ||| ||||| |||||| |
Sbjct 1872452 AAGAGCAGACAGGCAAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAG 1872393
Query 132946 AAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCC 133005
|| || | |||||||||||| || || || |||||||| || |||| |||||| |||
Sbjct 1872392 AAGGTGAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCG 1872333
Query 133006 GAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCT 133065
|| ||||||| |||||||||||| || || || | ||| |||||||| || || | ||
Sbjct 1872332 GAGAAGAAGATGCCCTCGACGGCGGCAAAGGCGATCAGCCGCTCGCCAAAGGTCGACTCG 1872273
Query 133066 TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125
| | || |||||| |||||||| |||||||| | |||| ||| || || || |||
Sbjct 1872272 TCGTCGGAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCG 1872213
Query 133126 ATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAAC--GCACGTAGGTGTCGATGAGGG 133183
|||||||| ||| | | || ||| || | || | | ||| |||||||| ||
Sbjct 1872212 ATGGCGTTGAAC--AGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCA 1872155
Query 133184 TCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCG 133243
||| ||| |||||||||| | ||||||||| ||| || |||||||| |||||| |
Sbjct 1872154 GCGAGTACGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGG 1872095
Query 133244 CCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGT 133303
||||| |||||||| || | ||| ||||| ||||| || ||||| || || || |
Sbjct 1872094 CCTCGGGGACCTGCACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCAT 1872035
Query 133304 CGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGC 133363
|| || || || ||||||||||||||| |||||| ||||||| || ||| | |
Sbjct 1872034 CGGAAGCAGCAAAGAAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGAGCC 1871975
Query 133364 G---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACG 133420
| ||||||||||| | |||||||| || || | ||||||| ||||||| || || |
Sbjct 1871974 GGTTCTCCCAGTCGCCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAG 1871915
Query 133421 CCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACC 133480
||||||| || |||||||| ||| || || || || ||||| || | ||||||||
Sbjct 1871914 CCTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAACC 1871855
Query 133481 GGCGGGGGTTTTCGCGCAACAGCGGCTC 133508
||||| |||| || | |||||||||
Sbjct 1871854 GGCGGTGGTTCTCCTTGAGCAGCGGCTC 1871827
>seq2
Length=4160336
Score = 123 bits (136), Expect = 2e-23
Identities = 158/215 (73%), Gaps = 2/215 (1%)
Strand=Plus/Minus
Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304
||||||| || || || || || || ||||| ||||||||| |||| || ||| | |||
Sbjct 1737019 TGCAAATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCG 1736960
Query 38305 ACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
||| | | | |||| | || || |||| ||||| ||||| |||||| | |||||
Sbjct 1736959 ACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 1736901
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || |||| ||| ||||| ||||| || |||| || || || |||||||||
Sbjct 1736900 CAGCGACTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCTGACTACAAC 1736841
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| | || ||||| | || |||||
Sbjct 1736840 ATCCAGAAGGAGTCCACTCTGCACCTTGTCCTGCG 1736806
Score = 111 bits (122), Expect = 2e-19
Identities = 157/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 38242 AAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCA 38301
||||||| || || || || || || || || || || |||||| | || || ||| |
Sbjct 1074821 AAATGCAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTT 1074880
Query 38302 CCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
|||||| | | | |||| | || || |||| ||||| |||||||||||| | |||
Sbjct 1074881 CCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGAC 1074939
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || || | ||| || || ||||| || |||| || ||||| ||||||
Sbjct 1074940 CAGCAGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTAC 1074999
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||||| ||||| | || || ||| | || |||||
Sbjct 1075000 AACATCCAGAAGGAGTCCACTCTCCATCTCGTTCTGCG 1075037
>seq1
Length=4858313
Score = 120 bits (132), Expect = 3e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || || || ||||||||| |||| |||||| | |
Sbjct 3612723 ATGCAGATTTTCGTGAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCTTCT 3612664
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || || |||| ||||| ||||| || ||| | |||||
Sbjct 3612663 GACACTATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 3612605
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | ||| || || ||||| || |||| || |||||| |||||||||
Sbjct 3612604 GCAGCGACTTATCTTCGCCGGTAAGCAGCTTGAGGACGGACGAACCCTCTCCGACTACAA 3612545
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
|||||| |||||| | || || || | ||||| || | |||| ||||
Sbjct 3612544 CATCCAGAAGGAATCCACTCTCCACCTTGTGCTCCGACTCCGAGGTGGCC 3612495
Score = 118 bits (130), Expect = 1e-21
Identities = 143/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| || || |||||||| |||| || ||| || ||
Sbjct 3613390 ATGCAGATTTTCGTGAAGACCCTCACTGGAAAGACCATCACTCTCGAGGTTGAGTCCTCC 3613331
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || || |||| ||||| ||||| |||||| | |||||
Sbjct 3613330 GATACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 3613272
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||||| ||| || || ||||| || || | || |||||| ||||||||
Sbjct 3613271 GCAGCGACTCATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGAACCCTCTCTGACTACAA 3613212
Query 38423 CATCCAAAAGGA 38434
|||||| |||||
Sbjct 3613211 CATCCAGAAGGA 3613200
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || || || ||||||||| |||| || ||| || ||
Sbjct 3612951 ATGCAGATCTTTGTCAAGACCCTGACTGGAAAGACCATCACCCTCGAGGTTGAGTCCTCC 3612892
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || || || | ||||| ||||| |||||| | |||||
Sbjct 3612891 GATACCATTGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCA 3612833
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | ||| || || ||||| || |||| || || || |||||||||
Sbjct 3612832 GCAGCGACTTATCTTCGCTGGTAAGCAGCTCGAGGACGGACGAACTCTGTCCGACTACAA 3612773
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||| | || || ||| |||| || ||
Sbjct 3612772 CATCCAGAAGGAGTCTACTCTCCATCTGGTCCTCCG 3612737
Score = 98.7 bits (108), Expect = 1e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| |||||||||||| | ||||| ||||| ||||||| ||| || || ||||| ||
Sbjct 3613525 GACAAGGAGGGAATTCCCCCGGACCAGCAGCGACTCATTTTCGCCGGTAAGCAGCTCGAG 3613466
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|||| || || || ||||||||||||||| ||||| | || || ||| |||| ||
Sbjct 3613465 GACGGACGAACTCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCATCTGGTTCTC 3613406
Query 38457 CG 38458
||
Sbjct 3613405 CG 3613404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172543661440
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