Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1 152 2e-31 seq4 149 2e-30 seq2 118 4e-21 >seq1 Length=4858313 Score = 152 bits (168), Expect = 2e-31 Identities = 282/413 (68%), Gaps = 3/413 (1%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 ||||||||| | || | || | | ||| ||||| || || || |||| |||||| Sbjct 4779568 GGAAAGCCCAACATCGAGGTCGAGTTTAAGGGTGAGACCAAGGTCTTCACTCCCGAAGAA 4779509 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || |||||| || | || || ||||| || || || || ||| |||| || Sbjct 4779508 ATCTCCTCTATGATTATCACAAAGATGAAGGAGACTGCTGAGGGATACCTTGGAACTAAG 4779449 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || | || || || ||||| ||||||||||| ||||||||| | || || || || || Sbjct 4779448 GTGAACGACGCTGTCATTACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACC 4779389 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || || || || | |||||||||| | || |||| |||| || || || ||||| || Sbjct 4779388 AAGGACGCTGGTCTTATTGCTGGTCTGAACGTTCAGAGAATCATCAACGAGCCTACCGCC 4779329 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 || || | || || || || | || || || || | || ||| | | | Sbjct 4779328 GCCGCCATTGCCTACGGTCTTGACAA---GAAGGAGACTGGCGAGCGAAACGTGCTCATC 4779272 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 || ||| |||| ||||||||| |||| ||| | || || ||||| ||||| | ||| Sbjct 4779271 TTCGATCTTGGAGGAGGAACTTTTGATGTCTCTCTTCTGTCTATTGAGGATGGCATCTTT 4779212 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| ||| ||| || || ||||| || ||||| || |||| || Sbjct 4779211 GAGGTCAAGGCCACCGCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAA 4779159 Score = 149 bits (164), Expect = 2e-30 Identities = 281/413 (68%), Gaps = 3/413 (1%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 ||||||||| | || | || | | ||| || || || || ||| |||| |||||| Sbjct 6688 GGAAAGCCCAACATCGAGGTCGAGTTTAAGGGCGAGACCAAGGTCTTTACTCCCGAAGAA 6747 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || |||||| |||| || || ||||| || || || || ||| |||| | Sbjct 6748 ATCTCCTCTATGATTCTCACAAAGATGAAGGAGACTGCTGAGGGATACCTTGGAACCAAG 6807 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || | || || || ||||| ||||||||||| ||||||||| | || || || || || Sbjct 6808 GTGAACGACGCTGTCATTACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACC 6867 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || || || || | |||||||||| | || || | |||| ||||| || ||||| || Sbjct 6868 AAGGACGCTGGTCTTATTGCTGGTCTGAACGTCCAGAGAATCATTAACGAGCCTACCGCC 6927 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 || || | || || || || | || || || || | || ||| | | | Sbjct 6928 GCCGCCATTGCCTACGGCCTTGACAA---GAAGGAGACTGGCGAGCGAAACGTGCTCATC 6984 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 || ||| |||| ||||||||| ||| ||| | || || ||||| ||||| | ||| Sbjct 6985 TTCGATCTTGGAGGAGGAACTTTCGATGTCTCTCTTCTCTCTATTGAGGATGGTATCTTT 7044 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| ||| ||| || || ||||| || ||||| || |||| || Sbjct 7045 GAGGTCAAGGCCACCGCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAA 7097 Score = 95.1 bits (104), Expect = 5e-14 Identities = 182/267 (68%), Gaps = 6/267 (2%) Strand=Plus/Minus Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 ||||| ||||| || ||||| ||||| || || || || || || ||||| || ||| Sbjct 2191717 ACTGTCCCCGCCTACTTCAACGATGCCCAGCGACAGGCCACCAAGGATGCCGGTATCATT 2191658 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 |||||| | || ||||| |||||| |||| || || || || || || | || || || Sbjct 2191657 GCTGGTCTGAACGTTCTGCGAATTGTTAACGAGCCCACTGCCGCCGCCATTGCCTACGGT 2191598 Query 451451 CTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGA 451510 || | | || | | || || || | ||| | || | ||| ||||||||||| Sbjct 2191597 CTGG----ACCACACCGAT--GACGAGAAGCAGATTGTTGTCTACGATCTTGGTGGAGGA 2191544 Query 451511 ACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAAT 451570 || |||| |||| | || || ||||| ||| || ||||| || || ||| Sbjct 2191543 ACCTTTGATGTTTCTCTCCTGTCCATTGAGTCTGGTGTCTTTGAGGTTCTTGCCACCGCC 2191484 Query 451571 GGTGATACTCATCTAGGAGGTGAAGAT 451597 ||||| || ||||| || ||||| ||| Sbjct 2191483 GGTGACACCCATCTTGGTGGTGAGGAT 2191457 >seq4 Length=2925033 Score = 149 bits (164), Expect = 2e-30 Identities = 281/413 (68%), Gaps = 3/413 (1%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 ||||||||| | || | || | | ||| || || || || ||| |||| |||||| Sbjct 2907627 GGAAAGCCCAACATCGAGGTCGAGTTTAAGGGCGAGACCAAGGTCTTTACTCCCGAAGAA 2907568 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || |||||| |||| || || ||||| || || || || ||| |||| | Sbjct 2907567 ATCTCCTCTATGATTCTCACAAAGATGAAGGAGACTGCTGAGGGATACCTTGGAACCAAG 2907508 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || | || || || ||||| ||||||||||| ||||||||| | || || || || || Sbjct 2907507 GTGAACGACGCTGTCATTACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACC 2907448 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || || || || | |||||||||| | || || | |||| ||||| || ||||| || Sbjct 2907447 AAGGACGCTGGTCTTATTGCTGGTCTGAACGTCCAGAGAATCATTAACGAGCCTACCGCC 2907388 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 || || | || || || || | || || || || | || ||| | | | Sbjct 2907387 GCCGCCATTGCCTACGGCCTTGACAA---GAAGGAGACTGGCGAGCGAAACGTGCTCATC 2907331 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 || ||| |||| ||||||||| ||| ||| | || || ||||| ||||| | ||| Sbjct 2907330 TTCGATCTTGGAGGAGGAACTTTCGATGTCTCTCTTCTCTCTATTGAGGATGGTATCTTT 2907271 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| ||| ||| || || ||||| || ||||| || |||| || Sbjct 2907270 GAGGTCAAGGCCACCGCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAA 2907218 >seq2 Length=4160336 Score = 118 bits (130), Expect = 4e-21 Identities = 275/414 (66%), Gaps = 3/414 (1%) Strand=Plus/Minus Query 451192 AGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGA 451251 |||||||||| | || | || | | || ||||| || || || |||| || || Sbjct 3418051 AGGAAAGCCCAACATCGAGGTCGAGTTCAAGGGTGAGACCAAGGTCTTCACTCCCGAGGA 3417992 Query 451252 AATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCC 451311 || || || ||| | || || || ||||| || || || || || | ||| Sbjct 3417991 GATCTCTTCCATGATCCTCACCAAGATGAAGGAGACCGCTGAGGGCTACCTCGGTGGAAA 3417932 Query 451312 AGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 || |||||||| || || ||||| || || || ||||| ||| | || || || || || Sbjct 3417931 GGTCACTGATGCCGTCATCACTGTCCCTGCCTACTTCAACGATTCTCAGCGACAGGCCAC 3417872 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 || ||||| || | ||||| ||| | || || | ||||| || || || ||||| || Sbjct 3417871 CAAGGATGCCGGTCTCATTGCCGGTCTGAACGTCCAGCGAATCATCAACGAGCCTACCGC 3417812 Query 451432 AGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGT 451491 ||||| | || || || || | || || || | | || ||| || | | Sbjct 3417811 CGCTGCCATTGCCTACGGTCTTGACAAG---AAGGAGGCTGGTGAGCGAAACGTTCTCAT 3417755 Query 451492 ATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATT 451551 || ||| ||||||||||||| ||| |||| | || || ||||| || || | || Sbjct 3417754 CTTCGATCTTGGTGGAGGAACCTTCGATGTTTCTCTGCTGTCCATTGAGGACGGTATCTT 3417695 Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| ||| |||||| || ||||| || ||||| ||| | ||||| Sbjct 3417694 CGAGGTCAAGGCCACCGCTGGTGACACCCATCTTGGTGGTGAGGATTTCGATAA 3417641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717362130428