Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 134 2e-26 >seq5 Length=2767003 Score = 134 bits (148), Expect = 2e-26 Identities = 172/235 (73%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 102099 GCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 102158 |||||| | || | || || || | ||||| || || ||||| | |||||| | | Sbjct 1872208 GCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATC--T 1872265 Query 102159 ACAAAGTCGCGTT--CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCT 102216 | | | || || |||||| ||||| || |||| ||||| || ||||| |||| Sbjct 1872266 CCGACGACGAGTCGACCTTTGGCGAGCGGCTGATCGCCTTTGCCGCCGTCGAGGGCATCT 1872325 Query 102217 TCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 102276 ||||||| || || ||| | | || | |||||||||||||||||||||||||| || | Sbjct 1872326 TCTTCTCCGGCTCGTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCC 1872385 Query 102277 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 || ||||||||||||||| ||||| || |||||||| || ||| || ||||| Sbjct 1872386 TCACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACCGACTTTGC 1872440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742081869520