Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1 165 7e-35 seq4 150 1e-30 >seq1 Length=4858313 Score = 165 bits (182), Expect = 7e-35 Identities = 574/883 (65%), Gaps = 22/883 (2%) Strand=Plus/Minus Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786 |||||| ||| || ||||||| ||| | || ||||| ||||| || || || Sbjct 4779256 GGAACTTTTGATGTCTCTCTTCTGTCTATTGAGGATGGCATCTTTGAGGTCAAGGCCACC 4779197 Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844 |||||| | ||||| ||||| || || ||||| || |||| || | || | || Sbjct 4779196 GCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 4779139 Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA--AGCTCTTCG 551902 || | || || || ||||| |||| || | || || | ||| |||||| || Sbjct 4779138 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGACATCTCGAC--CAACCAGCGAGCTCTCCG 4779081 Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962 || || |||| || || || ||||||| ||| ||||||||||| |||| || | Sbjct 4779080 ACGACTGCGAACCGCCTGTGAGCGAGCCAAGCGAACTCTTTCATCTTCCGCTCAGACTTC 4779021 Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022 |||||| | || || | | ||||| ||||||| | || | || | | ||| Sbjct 4779020 CATTGAAATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACCCGAGCCCG 4778961 Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082 ||| || || | ||| |||||||| || || |||| || || || | ||| | Sbjct 4778960 ATTCGAGGAGCTCTGTCAGGATCTCTTCCGAGGCACTCTTGAGCCTGTTGAGAAGGTTCT 4778901 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 | || | ||||| || || || || | || ||||| ||||||||||| || || Sbjct 4778900 GAAGGACGCCAAGATGGACAAGGCCTCTGTCAACGAGATTGTCCTTGTTGGTGGCTCCAC 4778841 Query 552143 AAGAATTCCTAAAATTCGCGAA----ATGT-TAAGTTCTTATTTCAATGGTAAAAAATTA 552197 ||| ||| || || ||| ||| | | ||| ||||| || || | | Sbjct 4778840 TCGAA-TCCCCAAGGTCCAGAAGCTCGTGTCTGACTTC----TTCAACGGCAAGGAGCTG 4778786 Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257 || | | || || ||||||||||||||||| || || || |||| || |||||| Sbjct 4778785 AACCGATCGATCAACCCTGATGAGGCTGTTGCCTACGGAGCTGCTGTTCAGGCTGCTATT 4778726 Query 552258 CTTTCTGGACAAAC-TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCT 552316 || ||||| | || | | ||| || ||||| | || | || ||| ||||||| Sbjct 4778725 CTATCTGGTGACACTTCCTCCTCTACT-CAGGATATTCTGCTCCTTGACGTTGCTCCTCT 4778667 Query 552317 ATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTAC 552376 ||||||||| | || || | ||| ||| ||||||| || || ||| |||| | || Sbjct 4778666 CTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCGAC 4778607 Query 552377 TATTCCTTGTAAAAAATCTCGTG-TATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435 |||||| || || || || | || || || || | || || || ||| |||| Sbjct 4778606 TATTCCCACCAAGAAGTC-CGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGTGTTC 4778548 Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495 || || | || || || || || || || || || || ||||||| | Sbjct 4778547 TGATCCAGGTCTTCGAGGGTGAGCGAGCTCAGACCAAGGACAACAACATTCTTGGTAAGT 4778488 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 || | | |||||||||||||||||||| || || || || ||||| || || |||| Sbjct 4778487 TTGAGCTTTCCGGTATTCCTCCTGCTCCTCGAGGTGTTCCTCAGATTGAGGTCACCTTCG 4778428 Query 552556 ATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 || |||| ||||| || ||| | || || ||||| ||| || Sbjct 4778427 ATGTCGACGCCAACGGTATTCTCAACGTCTCTGCTGTTGAGAA 4778385 Score = 152 bits (168), Expect = 4e-31 Identities = 558/868 (64%), Gaps = 22/868 (3%) Strand=Plus/Plus Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786 |||||| || || ||||||| ||| | || |||||| ||||| || || || Sbjct 7000 GGAACTTTCGATGTCTCTCTTCTCTCTATTGAGGATGGTATCTTTGAGGTCAAGGCCACC 7059 Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844 |||||| | ||||| ||||| || || ||||| || |||| || | || | || Sbjct 7060 GCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 7117 Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA--AGCTCTTCG 551902 || | || || || ||||| |||| || | || || | ||| |||||| || Sbjct 7118 TTCAGGAGTTYAAGCGAAAGCACAAGAAGGACATCTCGAC--CAACCAGCGAGCTCTYCG 7175 Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962 || || |||| ||||| || |||| || ||| |||| || ||| | |||| ||| | Sbjct 7176 ACGACTGCGAACCGCTTGTGAGCGAGCTAAGCGAACTCTCTCGTCTTCTGCTCAGACCTC 7235 Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022 |||||| | || || | | ||||| ||||||| | || | || | | ||| Sbjct 7236 CATTGAAATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACCCGAGCCCG 7295 Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082 ||| || || | ||| ||||| || || || |||| || || || | ||| | Sbjct 7296 ATTCGAGGAGCTCTGTCAGGATCTTTTCCGAGGCACTCTTGAGCCTGTTGAGAAGGTTCT 7355 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 | || | ||||| || || || || | || ||||| ||||||||||| || || Sbjct 7356 GAAGGACGCCAAGATGGACAAGGCCTCCGTCAACGAGATTGTCCTTGTTGGTGGCTCCAC 7415 Query 552143 AAGAATTCCTAAAATTCGCGAAA----TGT-TAAGTTCTTATTTCAATGGTAAAAAATTA 552197 |||| || || | | ||| ||| | | ||||| ||| || || | | Sbjct 7416 TCGAATCCCCAAGGTCCA-GAAGCTCGTGTCTGACTTCTT----CAACGGCAAGGAGCTG 7470 Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257 || | | || || ||||||||||||||||| || || || | || || |||||| Sbjct 7471 AACCGATCGATCAACCCTGATGAGGCTGTTGCCTACGGAGCTGCYGTYCAGGCTGCTATT 7530 Query 552258 CTTTCTGGACAAACTGATGAAAAACTA--CAAAATATTGTACTTGTAGATGTTACTCCTC 552315 || ||||| | ||| | ||| || | ||| | || | || ||| |||||| Sbjct 7531 CTRTCTGGTGAYACT--TCYTCCTCTACYCAGGAYATTCTGCTCCTTGAYGTTGCTCCTC 7588 Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375 | ||||||||| | || || | ||| ||| ||||||| || || ||| |||| | | Sbjct 7589 TCTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCGA 7648 Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435 ||||||| || || ||| || || || || | || || || ||| |||| Sbjct 7649 CTATTCCCACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGTGTTC 7708 Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495 || || | || || || || || || || || || || ||||||| | Sbjct 7709 TGATCCAGGTCTTCGAGGGTGAGCGAGCTCAGACCAAGGACAACAACATTCTTGGTAAGT 7768 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 || | | ||||| |||||||||||||| || || || || ||||| || || |||| Sbjct 7769 TTGAACTTTCTGGTATCCCTCCTGCTCCTCGAGGTGTTCCTCAGATTGAGGTCACCTTCG 7828 Query 552556 ATATCGATGCCAATGGAATTTTGAATGT 552583 || |||| ||||| || ||| | || || Sbjct 7829 ATGTCGACGCCAACGGTATTCTCAACGT 7856 >seq4 Length=2925033 Score = 150 bits (166), Expect = 1e-30 Identities = 559/868 (64%), Gaps = 22/868 (3%) Strand=Plus/Minus Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786 |||||| || || ||||||| ||| | || |||||| ||||| || || || Sbjct 2907315 GGAACTTTCGATGTCTCTCTTCTCTCTATTGAGGATGGTATCTTTGAGGTCAAGGCCACC 2907256 Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844 |||||| | ||||| ||||| || || ||||| || |||| || | || | || Sbjct 2907255 GCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 2907198 Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA--AGCTCTTCG 551902 || | || || || ||||| |||| || | || || | ||| |||||| || Sbjct 2907197 TTCAGGAGTTYAAGCGAAAGCACAAGAAGGACATCTCGAC--CAACCAGCGAGCTCTYCG 2907140 Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962 || || |||| ||||| || |||| || ||| |||| || ||| | |||| ||| | Sbjct 2907139 ACGACTGCGAACCGCTTGTGAGCGAGCTAAGCGAACTCTCTCGTCTTCTGCTCAGACCTC 2907080 Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022 |||||| | || || | | ||||| ||||||| | || | || | | ||| Sbjct 2907079 CATTGAAATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACCCGAGCCCG 2907020 Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082 ||| || || | ||| ||||| || || || |||| || || || | ||| | Sbjct 2907019 ATTCGAGGAGCTCTGTCAGGATCTTTTCCGAGGCACTCTTGAGCCTGTTGAGAAGGTTCT 2906960 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 | || | ||||| || || || || | || ||||| ||||||||||| || || Sbjct 2906959 GAAGGACGCCAAGATGGACAAGGCCTCCGTCAACGAGATTGTCCTTGTTGGTGGCTCCAC 2906900 Query 552143 AAGAATTCCTAAAATTCGCGAA----ATGT-TAAGTTCTTATTTCAATGGTAAAAAATTA 552197 ||| ||| || || ||| ||| | | ||| ||||| || || | | Sbjct 2906899 TCGAA-TCCCCAAGGTCCAGAAGCTCGTGTCTGACTTC----TTCAACGGCAAGGAGCTG 2906845 Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257 || | | || || ||||||||||||||||| || || || | || || |||||| Sbjct 2906844 AACCGATCGATCAACCCTGATGAGGCTGTTGCCTACGGAGCTGCCGTCCAGGCTGCTATT 2906785 Query 552258 CTTTCTGGACAAACTGATGAAAAACTA--CAAAATATTGTACTTGTAGATGTTACTCCTC 552315 || ||||| | ||| | ||| || | ||| | || | |||||| |||||| Sbjct 2906784 CTGTCTGGTGAYACT--TCTTCCTCTACCCAGGACATTCTGCTCCTTGATGTTGCTCCTC 2906727 Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375 | ||||||||| | || || | ||| ||| ||||||| || || ||| |||| | | Sbjct 2906726 TCTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCGA 2906667 Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435 ||||||| || || ||| || || || || | || || || ||| |||| Sbjct 2906666 CTATTCCCACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGTGTTC 2906607 Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495 || || | || || || || || || || || || || ||||||| | Sbjct 2906606 TGATCCAGGTCTTCGAGGGTGAGCGAGCTCAGACCAAGGACAACAACATTCTTGGTAAGT 2906547 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 || | | ||||| |||||||||||||| || || || || ||||| || || |||| Sbjct 2906546 TTGARCTTTCTGGTATCCCTCCTGCTCCTCGAGGTGTTCCTCAGATTGAGGTCACCTTCG 2906487 Query 552556 ATATCGATGCCAATGGAATTTTGAATGT 552583 || |||| ||||| || ||| | || || Sbjct 2906486 ATGTCGACGCCAACGGTATTCTCAACGT 2906459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029293831735090