Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq1 165 7e-35
seq4 150 1e-30
>seq1
Length=4858313
Score = 165 bits (182), Expect = 7e-35
Identities = 574/883 (65%), Gaps = 22/883 (2%)
Strand=Plus/Minus
Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786
|||||| ||| || ||||||| ||| | || ||||| ||||| || || ||
Sbjct 4779256 GGAACTTTTGATGTCTCTCTTCTGTCTATTGAGGATGGCATCTTTGAGGTCAAGGCCACC 4779197
Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844
|||||| | ||||| ||||| || || ||||| || |||| || | || | ||
Sbjct 4779196 GCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 4779139
Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA--AGCTCTTCG 551902
|| | || || || ||||| |||| || | || || | ||| |||||| ||
Sbjct 4779138 TTCAGGAGTTCAAGCGAAAGCACAAGAAGGACATCTCGAC--CAACCAGCGAGCTCTCCG 4779081
Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962
|| || |||| || || || ||||||| ||| ||||||||||| |||| || |
Sbjct 4779080 ACGACTGCGAACCGCCTGTGAGCGAGCCAAGCGAACTCTTTCATCTTCCGCTCAGACTTC 4779021
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022
|||||| | || || | | ||||| ||||||| | || | || | | |||
Sbjct 4779020 CATTGAAATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACCCGAGCCCG 4778961
Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082
||| || || | ||| |||||||| || || |||| || || || | ||| |
Sbjct 4778960 ATTCGAGGAGCTCTGTCAGGATCTCTTCCGAGGCACTCTTGAGCCTGTTGAGAAGGTTCT 4778901
Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142
| || | ||||| || || || || | || ||||| ||||||||||| || ||
Sbjct 4778900 GAAGGACGCCAAGATGGACAAGGCCTCTGTCAACGAGATTGTCCTTGTTGGTGGCTCCAC 4778841
Query 552143 AAGAATTCCTAAAATTCGCGAA----ATGT-TAAGTTCTTATTTCAATGGTAAAAAATTA 552197
||| ||| || || ||| ||| | | ||| ||||| || || | |
Sbjct 4778840 TCGAA-TCCCCAAGGTCCAGAAGCTCGTGTCTGACTTC----TTCAACGGCAAGGAGCTG 4778786
Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257
|| | | || || ||||||||||||||||| || || || |||| || ||||||
Sbjct 4778785 AACCGATCGATCAACCCTGATGAGGCTGTTGCCTACGGAGCTGCTGTTCAGGCTGCTATT 4778726
Query 552258 CTTTCTGGACAAAC-TGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCT 552316
|| ||||| | || | | ||| || ||||| | || | || ||| |||||||
Sbjct 4778725 CTATCTGGTGACACTTCCTCCTCTACT-CAGGATATTCTGCTCCTTGACGTTGCTCCTCT 4778667
Query 552317 ATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTAC 552376
||||||||| | || || | ||| ||| ||||||| || || ||| |||| | ||
Sbjct 4778666 CTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCGAC 4778607
Query 552377 TATTCCTTGTAAAAAATCTCGTG-TATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435
|||||| || || || || | || || || || | || || || ||| ||||
Sbjct 4778606 TATTCCCACCAAGAAGTC-CGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGTGTTC 4778548
Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495
|| || | || || || || || || || || || || ||||||| |
Sbjct 4778547 TGATCCAGGTCTTCGAGGGTGAGCGAGCTCAGACCAAGGACAACAACATTCTTGGTAAGT 4778488
Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555
|| | | |||||||||||||||||||| || || || || ||||| || || ||||
Sbjct 4778487 TTGAGCTTTCCGGTATTCCTCCTGCTCCTCGAGGTGTTCCTCAGATTGAGGTCACCTTCG 4778428
Query 552556 ATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598
|| |||| ||||| || ||| | || || ||||| ||| ||
Sbjct 4778427 ATGTCGACGCCAACGGTATTCTCAACGTCTCTGCTGTTGAGAA 4778385
Score = 152 bits (168), Expect = 4e-31
Identities = 558/868 (64%), Gaps = 22/868 (3%)
Strand=Plus/Plus
Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786
|||||| || || ||||||| ||| | || |||||| ||||| || || ||
Sbjct 7000 GGAACTTTCGATGTCTCTCTTCTCTCTATTGAGGATGGTATCTTTGAGGTCAAGGCCACC 7059
Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844
|||||| | ||||| ||||| || || ||||| || |||| || | || | ||
Sbjct 7060 GCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 7117
Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA--AGCTCTTCG 551902
|| | || || || ||||| |||| || | || || | ||| |||||| ||
Sbjct 7118 TTCAGGAGTTYAAGCGAAAGCACAAGAAGGACATCTCGAC--CAACCAGCGAGCTCTYCG 7175
Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962
|| || |||| ||||| || |||| || ||| |||| || ||| | |||| ||| |
Sbjct 7176 ACGACTGCGAACCGCTTGTGAGCGAGCTAAGCGAACTCTCTCGTCTTCTGCTCAGACCTC 7235
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022
|||||| | || || | | ||||| ||||||| | || | || | | |||
Sbjct 7236 CATTGAAATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACCCGAGCCCG 7295
Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082
||| || || | ||| ||||| || || || |||| || || || | ||| |
Sbjct 7296 ATTCGAGGAGCTCTGTCAGGATCTTTTCCGAGGCACTCTTGAGCCTGTTGAGAAGGTTCT 7355
Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142
| || | ||||| || || || || | || ||||| ||||||||||| || ||
Sbjct 7356 GAAGGACGCCAAGATGGACAAGGCCTCCGTCAACGAGATTGTCCTTGTTGGTGGCTCCAC 7415
Query 552143 AAGAATTCCTAAAATTCGCGAAA----TGT-TAAGTTCTTATTTCAATGGTAAAAAATTA 552197
|||| || || | | ||| ||| | | ||||| ||| || || | |
Sbjct 7416 TCGAATCCCCAAGGTCCA-GAAGCTCGTGTCTGACTTCTT----CAACGGCAAGGAGCTG 7470
Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257
|| | | || || ||||||||||||||||| || || || | || || ||||||
Sbjct 7471 AACCGATCGATCAACCCTGATGAGGCTGTTGCCTACGGAGCTGCYGTYCAGGCTGCTATT 7530
Query 552258 CTTTCTGGACAAACTGATGAAAAACTA--CAAAATATTGTACTTGTAGATGTTACTCCTC 552315
|| ||||| | ||| | ||| || | ||| | || | || ||| ||||||
Sbjct 7531 CTRTCTGGTGAYACT--TCYTCCTCTACYCAGGAYATTCTGCTCCTTGAYGTTGCTCCTC 7588
Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375
| ||||||||| | || || | ||| ||| ||||||| || || ||| |||| | |
Sbjct 7589 TCTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCGA 7648
Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435
||||||| || || ||| || || || || | || || || ||| ||||
Sbjct 7649 CTATTCCCACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGTGTTC 7708
Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495
|| || | || || || || || || || || || || ||||||| |
Sbjct 7709 TGATCCAGGTCTTCGAGGGTGAGCGAGCTCAGACCAAGGACAACAACATTCTTGGTAAGT 7768
Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555
|| | | ||||| |||||||||||||| || || || || ||||| || || ||||
Sbjct 7769 TTGAACTTTCTGGTATCCCTCCTGCTCCTCGAGGTGTTCCTCAGATTGAGGTCACCTTCG 7828
Query 552556 ATATCGATGCCAATGGAATTTTGAATGT 552583
|| |||| ||||| || ||| | || ||
Sbjct 7829 ATGTCGACGCCAACGGTATTCTCAACGT 7856
>seq4
Length=2925033
Score = 150 bits (166), Expect = 1e-30
Identities = 559/868 (64%), Gaps = 22/868 (3%)
Strand=Plus/Minus
Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786
|||||| || || ||||||| ||| | || |||||| ||||| || || ||
Sbjct 2907315 GGAACTTTCGATGTCTCTCTTCTCTCTATTGAGGATGGTATCTTTGAGGTCAAGGCCACC 2907256
Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844
|||||| | ||||| ||||| || || ||||| || |||| || | || | ||
Sbjct 2907255 GCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC--TTTG 2907198
Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAA--AGCTCTTCG 551902
|| | || || || ||||| |||| || | || || | ||| |||||| ||
Sbjct 2907197 TTCAGGAGTTYAAGCGAAAGCACAAGAAGGACATCTCGAC--CAACCAGCGAGCTCTYCG 2907140
Query 551903 TCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCAC 551962
|| || |||| ||||| || |||| || ||| |||| || ||| | |||| ||| |
Sbjct 2907139 ACGACTGCGAACCGCTTGTGAGCGAGCTAAGCGAACTCTCTCGTCTTCTGCTCAGACCTC 2907080
Query 551963 TATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAA 552022
|||||| | || || | | ||||| ||||||| | || | || | | |||
Sbjct 2907079 CATTGAAATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACCCGAGCCCG 2907020
Query 552023 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTT 552082
||| || || | ||| ||||| || || || |||| || || || | ||| |
Sbjct 2907019 ATTCGAGGAGCTCTGTCAGGATCTTTTCCGAGGCACTCTTGAGCCTGTTGAGAAGGTTCT 2906960
Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142
| || | ||||| || || || || | || ||||| ||||||||||| || ||
Sbjct 2906959 GAAGGACGCCAAGATGGACAAGGCCTCCGTCAACGAGATTGTCCTTGTTGGTGGCTCCAC 2906900
Query 552143 AAGAATTCCTAAAATTCGCGAA----ATGT-TAAGTTCTTATTTCAATGGTAAAAAATTA 552197
||| ||| || || ||| ||| | | ||| ||||| || || | |
Sbjct 2906899 TCGAA-TCCCCAAGGTCCAGAAGCTCGTGTCTGACTTC----TTCAACGGCAAGGAGCTG 2906845
Query 552198 AATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATT 552257
|| | | || || ||||||||||||||||| || || || | || || ||||||
Sbjct 2906844 AACCGATCGATCAACCCTGATGAGGCTGTTGCCTACGGAGCTGCCGTCCAGGCTGCTATT 2906785
Query 552258 CTTTCTGGACAAACTGATGAAAAACTA--CAAAATATTGTACTTGTAGATGTTACTCCTC 552315
|| ||||| | ||| | ||| || | ||| | || | |||||| ||||||
Sbjct 2906784 CTGTCTGGTGAYACT--TCTTCCTCTACCCAGGACATTCTGCTCCTTGATGTTGCTCCTC 2906727
Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375
| ||||||||| | || || | ||| ||| ||||||| || || ||| |||| | |
Sbjct 2906726 TCTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCGA 2906667
Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435
||||||| || || ||| || || || || | || || || ||| ||||
Sbjct 2906666 CTATTCCCACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGTGTTC 2906607
Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495
|| || | || || || || || || || || || || ||||||| |
Sbjct 2906606 TGATCCAGGTCTTCGAGGGTGAGCGAGCTCAGACCAAGGACAACAACATTCTTGGTAAGT 2906547
Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555
|| | | ||||| |||||||||||||| || || || || ||||| || || ||||
Sbjct 2906546 TTGARCTTTCTGGTATCCCTCCTGCTCCTCGAGGTGTTCCTCAGATTGAGGTCACCTTCG 2906487
Query 552556 ATATCGATGCCAATGGAATTTTGAATGT 552583
|| |||| ||||| || ||| | || ||
Sbjct 2906486 ATGTCGACGCCAACGGTATTCTCAACGT 2906459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029293831735090
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