Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq6 203 3e-47
seq3 87.8 1e-12
>seq6
Length=2636511
Score = 203 bits (224), Expect = 3e-47
Identities = 410/605 (68%), Gaps = 25/605 (4%)
Strand=Plus/Plus
Query 29799 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 29858
|||||| | |||||||||||| ||| || ||||||||||||| ||| |||| || |||
Sbjct 2518929 CTTCAGAGCGTCCACGTGATCCTTGTACACATGAGCGTCTCCCATGGTATGGATAAGCTC 2518988
Query 29859 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29918
||| || || |||| || || || ||||| || | |||| ||| ||| ||
Sbjct 2518989 TCCACAGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCATAGGAGGCAAT 2519048
Query 29919 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTC 29978
||| ||||| || || || |||| || | |||| |||||| ||||||||||| |||
Sbjct 2519049 GTTGAAGGGAACACCCAGACCCAGATCACATGACCGCTGGTACAGCTGACACGACAGCCG 2519108
Query 29979 TCCGTCGCTCA----------------CGTAAAACTGACACATGGTGTGGCACGGAGGAA 30022
||| ||||||| |||| ||||| || | ||||||| |||||||
Sbjct 2519109 TCC-TCGCTCAGAGTTCTTGTACGACACGTAGAACTGGCAGAACATGTGGCAGGGAGGAA 2519167
Query 30023 GAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTG 30082
||||||| | || ||| |||||||||||| ||| ||||| || | ||| | |
Sbjct 2519168 GAGCCATTTTGGACAGGTCAGCGGGGTTCCAGGCTGACAGAATGATTCGACGGTCCTGAG 2519227
Query 30083 GGTTGTTCCTGA---TGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGT 30139
||||| | ||| || || ||| | |||| ||||||||||| ||| || | ||
Sbjct 2519228 GGTTGGTTTTGAGAGTGTGGATCAC--CTGTTTG-AGCTGATCCACACCCTGGCCAGTGT 2519284
Query 30140 AGTCTGCCCTCATG-TCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACC 30198
| |||| ||| ||| |||| || ||||| ||||| | ||| ||||| || || ||
Sbjct 2519285 AATCTGTG-TCACAATCCTTGTATTCGGCTCCAAAATGACGCCATTGGAAGCCATATACA 2519343
Query 30199 GGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAA 30258
||||||||||||||||| || || | || || ||| |||| ||| || ||||
Sbjct 2519344 GGTCCCAGGTCTCCCTCACGTCTATGTCCCAATCCAGCCTTTTCCAGAAACTCCTTGGAT 2519403
Query 30259 CCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCT 30318
|| || ||||||| || | | || ||| |||| ||| || || | ||
Sbjct 2519404 CCATTTCCGTCCCAAATATGAATGTTTTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCG 2519463
Query 30319 CTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGG 30378
|| ||||| || || ||||||| ||| | ||||||||| ||| || || |
Sbjct 2519464 GCCACAAACCAGAGAAGTTCCTCCAAAACGCCTCGGTAAAAGACCCGCTTTGTGGTCAAC 2519523
Query 30379 AGGGG 30383
|||||
Sbjct 2519524 AGGGG 2519528
>seq3
Length=2943663
Score = 87.8 bits (96), Expect = 1e-12
Identities = 135/186 (73%), Gaps = 10/186 (5%)
Strand=Plus/Plus
Query 52015 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGT 52074
||||||||||| | || | ||| ||| | ||| |||| || ||||||||||| |||
Sbjct 394723 TCGTCAAGGTGCGAATGCGAACCACCAAGATCCCCCAGATTGGAGACAAGTTTGCCTCGC 394782
Query 52075 -TCACGGCGCAAAAGGGGACG--TGCGGAGCCGTCCTGACCCAGGAGGACATGCCCTT-- 52129
|||||| || ||||| || || | | ||| | ||| | ||||| ||||| ||
Sbjct 394783 GTCACGGA-CAGAAGGGTACCATTGGTGTGACGTACCGACAC--GAGGATATGCCGTTTT 394839
Query 52130 CGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCATCCAGGAT 52189
|| | || || | |||||||| |||||||||||||||||||| |||| || | ||
Sbjct 394840 CGGCC--GAGGGTATCGTGCCCGATATCATCATCAACCCCCACGCCATTCCCTCGCGTAT 394897
Query 52190 GACCGT 52195
||||||
Sbjct 394898 GACCGT 394903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617395818893
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |