Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq2 100 2e-16
seq1 98.7 8e-16
>seq2
Length=4160336
Score = 100 bits (110), Expect = 2e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| || | ||| || ||| ||| || || || ||||| ||||| || ||||
Sbjct 1075040 AGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGG 1074981
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||||||||| || || |||||||| || |||| ||||| ||||||
Sbjct 1074980 CCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCC 1074921
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || || | | | || || | ||||||||| | ||
Sbjct 1074920 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTG 1074861
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || || | || || ||||||||||||||
Sbjct 1074860 ATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1074823
Score = 95.1 bits (104), Expect = 9e-15
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623
|| || ||| ||| || || || ||||| ||||| ||| |||| |||| || | ||||
Sbjct 1736818 TGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCGGCCGTCCTCGAGCTGC 1736877
Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|| ||||| || ||||||||||| || |||| ||||| ||||||||||||
Sbjct 1736878 TTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 1736927
>seq1
Length=4858313
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||| ||| || || ||| || || || ||||| || || ||| |||| |||| ||
Sbjct 3612743 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCCTCG 3612802
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| ||||||||| || || || |||||||| || |||| ||||| ||||||||||| |
Sbjct 3612803 AGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGA 3612862
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| || || | | | || || | ||| ||||| | || || || |||
Sbjct 3612863 ATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTTT 3612922
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| |||| || || ||||| ||||||||
Sbjct 3612923 CCAGTCAGGGTCTTGACAAAGATCTGCAT 3612951
Score = 91.5 bits (100), Expect = 1e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||| ||| || || ||| || || || ||||| || || ||| |||| |||| ||
Sbjct 3613410 ACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGTCCGTCCTCG 3613469
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
| |||||||||||| || || |||||||| || |||| ||||| ||||||||||| |
Sbjct 3613470 AGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGA 3613529
Query 48678 ATCTT 48682
|||||
Sbjct 3613530 ATCTT 3613534
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634
||| || || || ||||| ||||| || |||| | || || | ||||||||| || ||
Sbjct 3613199 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCGGCCATCCTCAAGCTGCTTACCAGCGAA 3613258
Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694
|| |||||||| || |||| ||||| |||||||||||| ||||| || ||
Sbjct 3613259 AATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 3613318
Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754
| | | || || | ||| ||||| | || || || ||||| || | || || ||
Sbjct 3613319 GTCAATGGTATCGGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTGAGGGTCTTCAC 3613378
Query 48755 AAAAATCTGCAT 48766
|||||||||||
Sbjct 3613379 GAAAATCTGCAT 3613390
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
|| || || || ||||| || || || |||| |||| || | |||||||||||| ||
Sbjct 3612533 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAG 3612592
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
|| |||||||| || |||| ||| | ||||||||||| ||||| || ||
Sbjct 3612593 ATAAGTCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 3612652
Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755
| | || || || | ||| ||||| | || || || ||||| || | || || ||
Sbjct 3612653 TCGATAGTGTCAGAAGACTCGACCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCACG 3612712
Query 48756 AAAATCTGCAT 48766
|||||||||||
Sbjct 3612713 AAAATCTGCAT 3612723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937409650243
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |