Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq5 360 4e-94 seq2 324 3e-83 seq3 132 9e-26 >seq5 Length=2767003 Score = 360 bits (398), Expect = 4e-94 Identities = 599/863 (69%), Gaps = 30/863 (3%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| |||||||||||||||| | || |||||||||||| ||||||||| Sbjct 1871884 GAGATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGAT 1871943 Query 25534 CTGGCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTC 25588 || | ||||||||||| || |||| | |||| | ||| ||||||| | || Sbjct 1871944 CTCGGCAAGGACATGGGCGACTGGGAGAACCGGCTCAA--CAACGACGAGCGGTTCTTCA 1872001 Query 25589 TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG 25648 || | ||||| |||| |||||||| || || |||||||| ||||||||||| ||| | Sbjct 1872002 TCTCGCACGTGCTGGCCTTCTTTGCTGCTTCCGATGGTATTGTGAACGAGAACCTGGTGG 1872061 Query 25649 AGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 || ||||| || | || |||||| | ||||||||||| |||||||| |||||||| Sbjct 1872062 AGCGATTCTCCGGCGAGGTGCAGGTCCCCGAGGCCAAGTGCTTCTACGGCTTCCAGATCA 1872121 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAG 25765 || || || | ||||| || ||| | ||| ||||| || ||||| | | Sbjct 1872122 TGATGGAGAACATCCACTCGGAAACGTACTC---GCTGCTGATCGACACATACATCAAGG 1872178 Query 25766 ACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGA 25825 || | ||| || ||||| ||||||||| ||| ||| ||||||||| || Sbjct 1872179 ACCCCAAGGAGCGAACCTACCTGTTCAACGCCATCGAGACCATCCCCTGCATCAAGAAGA 1872238 Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCA-GAGCGCTACGTTTGGCGAGCGGCTG 25884 |||| ||||| | ||||||||| | | | ||| | || ||||||||||||||| Sbjct 1872239 AGGCCGACTGGGCGCTCAAGTGGATCTCCGACGACGAGT-CGACCTTTGGCGAGCGGCTG 1872297 Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 | |||||||| || || ||||||||||| ||| ||| ||||| || ||||||||||| Sbjct 1872298 ATCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCGTTCGCCTCCATCTTCTGG 1872357 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 |||||| || || ||||||||| || ||| ||||||||||||||| | | ||| Sbjct 1872358 CTCAAGAAGCGAGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGAGAC 1872417 Query 26005 GAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA---A 26061 |||||||| |||| || |||||||| ||||||| | || ||| ||| | || | Sbjct 1872418 GAGGGTCTGCACACCGACTTTGCCTGTCTGCTCTTCTCG---CAC---CTCGAGAACCGA 1872471 Query 26062 CCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 || || |||| ||| ||| | | || ||||| || | |||||| ||||||| Sbjct 1872472 CCCTC-CAAGAAGATTGTCGAGGACGTGATTGTCGAGGCCGTTGGTATCGAGCAGGAGTT 1872530 Query 26121 TCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATA 26180 | | || |||||| || |||||| |||| || Sbjct 1872531 CCTGACCGACGCTCTGCCCTGCGGACTGCTCGGAATGAACGCCAAGCTCATGTGCCAGTA 1872590 Query 26181 CATTGAGTATGTGGCCGACCATCTGCTG--TGCCAGCTGGGACTCGCCAGACTCTACAGT 26238 |||||||| ||| ||||||| ||||||| ||| || || | ||| |||||| Sbjct 1872591 CATTGAGTTTGTCGCCGACCGTCTGCTGGTTGC--TCTCGGCAACTCCAAGGTCTACAAC 1872648 Query 26239 ACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTT 26298 | | ||||| |||||||| ||||| ||||| ||| ||| || |||||||||||||| Sbjct 1872649 TCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCCGGCAAGACCAACTTCTTC 1872708 Query 26299 GAAAAGAGGGTCGGCGACTATCA 26321 || ||| |||| |||||| || Sbjct 1872709 GAGAAGCGGGTGTCCGACTACCA 1872731 >seq2 Length=4160336 Score = 324 bits (358), Expect = 3e-83 Identities = 968/1469 (66%), Gaps = 45/1469 (3%) Strand=Plus/Minus Query 221422 GGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGT 221481 |||| |||||||||||||||| |||||| ||||||| |||||||||| || Sbjct 4111532 GGCACCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACTC 4111473 Query 221482 GAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGG 221541 |||||||| || || | ||| || ||||| ||||| || || | | | ||||| Sbjct 4111472 GAAGGGCAGTCGGAGGGCCATGAAGGTATCAGCCAGACCCTGGACACCCAGAGCAATGGG 4111413 Query 221542 CCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAG 221601 | ||||| | ||||||| || || || || || || |||| ||| || | Sbjct 4111412 TCGGTGTCGCATGTTGGACTTCTTGGCCTCAGGGACAGGGTAGTAGTTTCGGTCAATGAT 4111353 Query 221602 ATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACAC 221661 ||||||||| | || || || | | ||| |||||||| | | | | | Sbjct 4111352 GGCGTTGAGGTTTCGCACAATCACCTTGGCAATATCGTGCAGCTTCTTGAAGTCGTAGAA 4111293 Query 221662 CAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTT 221721 | | | |||| | ||| | ||||| | | || || | | |||||||| Sbjct 4111292 GGAGTTGGTCTCGTC-TCGAGTG-----ACAAAGGTGGGCAGAGCGATGGAAGCCAGGTT 4111239 Query 221722 ACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCA 221781 || || || ||||| || | |||| | ||||| ||| |||||| | Sbjct 4111238 GCAGACAGCGACCTCATCAGGAGAAGAGTACTCGACAATCTCGCAACACAGGTTGGAAGA 4111179 Query 221782 CTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCAT 221841 ||||||||| ||||||| || || || ||||| || ||| ||||||||||||||||| Sbjct 4111178 CTTGATGGTACCCAGGTTCTTTTGGTTGGACTTTCGGTTGCAGGCGTCCTTGTAGAGCAT 4111119 Query 221842 AAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG-CGC 221900 ||||| || | ||| ||| ||||||| | || ||| || | ||||| | Sbjct 4111118 GAAGGGGTTACCGGACTCGGTCTGGCAGTCCAGAATGTGGTACCACAGCT-TCTGGGCAG 4111060 Query 221901 TCACCGTCCTCTTGACTGCA-CCCTCGGTCTTTTCATAC--CCGGTATAGA-GCATGTCA 221956 | || | | ||| | ||||| ||| || ||| | ||| || || || Sbjct 4111059 GGATGGTTCG-TCGACCTCGGCCCTC---CTTCTCGTACTGCTCGTACAGCTGCTTG--- 4111007 Query 221957 AACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAG 222016 |||| |||||||| | || || ||||| || ||| | ||| ||||| ||| |||| Sbjct 4111006 AACTCGTCACCGTAGACGTCATCGAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCAC 4110947 Query 222017 TGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGA 222076 | ||| | | ||| | || |||||| ||||| |||||||| || ||| | || ||| Sbjct 4110946 TCGGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCAGAGAGCCAGGAACAGA 4110887 Query 222077 TCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATG 222136 |||| || || ||||||| |||| ||| || | ||| || | ||||| || | | Sbjct 4110886 TCTCGGGCTCGGATCTCCTCCTTACCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGACG 4110827 Query 222137 TCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGA 222196 ||| ||||||| |||||||| || | ||| | || ||||||||||||||||| ||||| Sbjct 4110826 TCATCGTGCCAGGGCTCCAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCTCCCTGG 4110767 Query 222197 TCCACCATCCTCTCCAGAG----CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGA 222252 || | | | || || | |||| ||| || || | || || | |||||||| Sbjct 4110766 TCGA----CGTATCGAGCGGTGTTGTTGTAGACACGCAGCATGGGCACGATACCGTTGGA 4110711 Query 222253 TCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCC 222312 ||||||||| || |||||| | ||| ||| | | ||| | |||| || Sbjct 4110710 GGTACCGTTGGTTCCGGCAATGTAGGATCCGGTGGCTCGGATGTTGTGGATGGACAGACC 4110651 Query 222313 GATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTC 222372 ||||| || ||| || ||||| | || || ||||||| ||||| |||||| || Sbjct 4110650 AATACCTCCAGCGGACTTGGAGATGAGAGCACAAGTCTTGAGGGTGTCGTAGATGCCGTC 4110591 Query 222373 CATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACA 222432 || ||||| ||||| | ||| | || ||||| ||||||||||| | | || || | Sbjct 4110590 GATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTGGGGCTGGGGGGTTCC 4110531 Query 222433 GGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGT 222492 ||||| |||| || || ||||| || ||||| | |||||| | ||| || Sbjct 4110530 TGCGTTGTACAGGGTAGGGGAAGCGTGGGTGAAGTACTTCTGAGACATGTAGTTGTAGGT 4110471 Query 222493 CTCTACGACTCTGGCGATGTTGTCCCCGTGAAT-CTGCATGGCGCATCTCATGTACATGT 222551 ||| | | ||| ||| |||||||| ||||| || | | | | | || |||| ||| | Sbjct 4110470 CTCAATGGCTCGGGCAATGTTGTCGCCGTGGATACCGACAGACAC-TCGCATGATCATCT 4110412 Query 222552 ACTGGGGCCTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAG 222608 |||||| | || | |||| || ||| || | |||||||| | | ||||| | Sbjct 4110411 GCTGGGGTCGCTCGGCAACAGCGCCGTTG--ACTCG-CAGCAGGTAGGCTCGCTCCAGGG 4110355 Query 222609 TCTTGAACCCAAAGTAGTTG-AGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGC 222667 ||||||| |||||||||||| |||| ||||||| | ||| | | |||| ||| ||| Sbjct 4110354 TCTTGAAGCCAAAGTAGTTGTAGGT-GAAGTCTCGGTCGTAGAGAATGGCGCCGTTGAGC 4110296 Query 222668 TC--CGACTTGTGCTT-TACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAGCGTTC 222724 || | | | |||| ||| | ||| | | || ||||| | ||| | || | Sbjct 4110295 TCGTCCGCGTTCGCTTGAACGGT---GTCGTATAGCTCCTTGGACACCATGGGCGAGTGC 4110239 Query 222725 TCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAAC-GTGTC 222783 | ||| || ||||| |||| |||||| || | | | | | || ||| | || Sbjct 4110238 TTCTTGTTGCGAGGGTTCACGTAGTGGTAGAGATCGTAGACCACCTGTGAAAACTGCTTC 4110179 Query 222784 GGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAGG 222843 | |||||||||||||| || ||||||||||| || | |||| || ||||||| || Sbjct 4110178 TTG-GTCTGCTTGTGCAGGTTGGACACGGCGATTCGGGCAGCCAGAATCGCATAGTCGGG 4110120 Query 222844 GTGCACGGTGGTCATGCTGGCTAGGGTCT 222872 ||||| ||||||||| ||| ||||| Sbjct 4110119 GTGCAGAGTGGTCATGTAGGCCGCGGTCT 4110091 >seq3 Length=2943663 Score = 132 bits (146), Expect = 9e-26 Identities = 401/609 (66%), Gaps = 19/609 (3%) Strand=Plus/Plus Query 222026 TCTTT-GACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGT 222084 ||||| ||||| || |||||| |||||||| | ||||| || | || || ||||| | Sbjct 1832196 TCTTTCGACCCGCTTCATGAACAGGTCCGGCACCCACAATGCGTAGAACAGGTCTCTTGC 1832255 Query 222085 CCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTG 222144 | | |||||| | |||| |||||||| ||| | || || || | ||| || || || Sbjct 1832256 TCTGTTCTCCTCTGCTCCGTGGTTTTTCCGCAGGTTCAGGAAATCGAGAATATCGGCATG 1832315 Query 222145 CCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCAT 222204 ||| ||||||||||||| ||| | || ||||| |||||||| |||||||| || | ||| Sbjct 1832316 CCAGGGCTCCAGATAGATGGCAAACGCTCCGGGACGCTTGTTTCCACCCTGGTCGA-CAT 1832374 Query 222205 CCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGG 222263 | | | | | |||||| | | || | || || | || |||| | || | | Sbjct 1832375 ACCGTGCGGTGTTGTTGAACACCCTGAGCATGGGAACAATGCCACTGGACCTTCCTTGAG 1832434 Query 222264 TGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCGATACCACCGG 222323 || ||||| ||||| |||||| | ||| | || |||||||| || | Sbjct 1832435 ACCCAGTAATGATAGCACCCTTGGCCCTGATATTATGAATATGCAGACCGATACCTCCAG 1832494 Query 222324 CGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCT 222383 | ||||||||| || || ||||||| || || ||| || || || ||||| Sbjct 1832495 CCGTTTTCGAGATTTGCGCACACGTCTTGAGGGTATCGTAGATTCCGTCGATGGAGTC-- 1832552 Query 222384 CCTTGACGT--TCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAA 222441 || | | || ||||||||| ||||||| || | || | || ||| || || Sbjct 1832553 GGATGCCATAGCCACCAGAAAACAGGACGACAGTTGTCCCTGGGGAGTACCGGCATTGAA 1832612 Query 222442 CAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATC---GTACGTCTCTAC 222498 ||||||||| |||||||| || | || | |||| | |||||| || | Sbjct 1832613 AAGCGTGGGAGAAGCGTGTGTGAATT---TTCTGAGCGACAGAGCCGTGTACGTTTCCAG 1832669 Query 222499 GACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGG 222558 || ||||||| | ||| || || ||| || || | |||| ||| | || || Sbjct 1832670 CACCTTGGCGATATCGTCTCCATGGATCCCCAGAGCCACGCGCATGAGCATATGTTGAGG 1832729 Query 222559 CCTCTCCACAGGAC--CCT-TGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAA 222615 | || || || ||| || || |||| |||||| |||||||| |||||||| Sbjct 1832730 ACGTTCAACTATACTTCCTCCGGTTCT---TAGCAAGTACGACTTTTCCAGCGTCTTGAA 1832786 Query 222616 CCCAAAGTA 222624 |||||||| Sbjct 1832787 GCCAAAGTA 1832795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844323967040