Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq1 145 5e-29
>seq1
Length=4858313
Score = 145 bits (160), Expect = 5e-29
Identities = 532/824 (65%), Gaps = 12/824 (1%)
Strand=Plus/Minus
Query 475364 GCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCAT 475421
|| || |||||||| | ||||| |||||||| || ||||| || |||| || | ||
Sbjct 4779202 GCCACCGCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC 4779143
Query 475422 GGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAAC--ATCTGCTAAAGC 475479
| |||| | || |||||| | || | || || | || || | | || | ||
Sbjct 4779142 --TTTGTTCAGGAGTTCAAGCGAAAGCACAAGAAGGACATCTCGACCAACCAGCGA--GC 4779087
Query 475480 ATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCA 475539
| |||| || |||| || ||||| || || |||||| ||||||| ||| | ||||
Sbjct 4779086 TCTCCGACGACTGCGAACCGCCTGTGAGCGAGCCAAGCGAACTCTTTCATCTTCCGCTCA 4779027
Query 475540 AACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAG 475599
||| | ||||| | || ||||| | || || ||||||| | || || || |
Sbjct 4779026 GACTTCCATTGAAATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACCCG 4778967
Query 475600 GGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACA 475659
|| ||| || || | ||| |||||||| || || |||| || ||||| |
Sbjct 4778966 AGCCCGATTCGAGGAGCTCTGTCAGGATCTCTTCCGAGGCACTCTTGAGCCTGTTGAGAA 4778907
Query 475660 AGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGG 475719
||||| | || | || | ||||| | ||| | || ||||| ||||| || ||
Sbjct 4778906 GGTTCTGAAGGACGCCAAGATGGACAAGGCCTCTGTCAACGAGATTGTCCTTGTTGGTGG 4778847
Query 475720 TTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGT 475778
|| || |||| || || | |||| | | | | | || || || || ||
Sbjct 4778846 CTCCACTCGAATCCCCAAGGTCC-AGAAGCTCGTGTCTGACTTCTTCAACGGCAAGGAGC 4778788
Query 475779 TAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTA 475838
| || | | || |||||||| |||||||| || ||||||||||| || || ||||
Sbjct 4778787 TGAACCGATCGATCAACCCTGATGAGGCTGTTGCCTACGGAGCTGCTGTTCAGGCTGCTA 4778728
Query 475839 TTTTATCAGGTCAATCAGACGAGAA-ACTAAATAATATTGTACTTGTTGACGTAACTCCA 475897
|| |||| ||| | | | ||| | | |||| | || ||||||| ||||
Sbjct 4778727 TTCTATCTGGTGACACTTCCTCCTCTACTCAGGA-TATTCTGCTCCTTGACGTTGCTCCT 4778669
Query 475898 CTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACT 475957
|| || | ||| | || || | ||| || ||||||| || || || | |||| |
Sbjct 4778668 CTCTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACTCG 4778609
Query 475958 CCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTA 476017
|||| || ||| || || | || ||||| || |||| || || | |||
Sbjct 4778608 ACTATTCCCACCAAGAAGTCCGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGTGTT 4778549
Query 476018 ACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACT 476077
||||| |||| || ||||| || || || || || |||| ||||| |
Sbjct 4778548 CTGATCCAGGTCTTCGAGGGTGAGCGAGCTCAGACCAAGGACAACAACATTCTTGGTAAG 4778489
Query 476078 TTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTT 476137
||| | ||| ||||||||||||||||| |||| |||||||| ||||| || || ||
Sbjct 4778488 TTTGAGCTTTCCGGTATTCCTCCTGCTCCTCGAGGTGTTCCTCAGATTGAGGTCACCTTC 4778429
Query 476138 GATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181
||| | || || || |||||||| || || ||||| ||| ||
Sbjct 4778428 GATGTCGACGCCAACGGTATTCTCAACGTCTCTGCTGTTGAGAA 4778385
Score = 129 bits (142), Expect = 4e-24
Identities = 364/552 (66%), Gaps = 8/552 (1%)
Strand=Plus/Minus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTG-TTTGGCAAAATGGTAA 474387
||| | || || ||| | ||||| || ||| ||||| || ||| || || | |
Sbjct 4779847 GCAGTAGGAATCGATCTTGGAACCACATACTCCTGTGTGGCCCATTTCGCTAAC-GACAG 4779789
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
||| ||||| || ||||||||||| || || ||||||| || || | ||| |||| ||
Sbjct 4779788 AGTCGAAATCATCGCCAATGACCAGGGAAACCGAACAACTCCCTCGTTTGTGGCTTTCAC 4779729
Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507
|| ||||||| || ||||| |||||||| || | || || || || |||| ||
Sbjct 4779728 CGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCAGGCAGCCATGAACCCTGCAAA 4779669
Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567
|| | ||||| || || || |||||||||| || ||||| || | |||||
Sbjct 4779668 CACAGTCTTTGACGCCAAGCGACTGATTGGTCGAAAGTTTGACGACCCTGAGGTCCAGAA 4779609
Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626
||| || | || || ||| | || || ||||| || || | || || |
Sbjct 4779608 TGACGCCAAGCACTTCCCCTTCAAGATCATCGATAAGGGTGGAAAGCCCAACATCGAGGT 4779549
Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685
| | | | ||||| || || || | || ||| |||| || || ||| || |
Sbjct 4779548 CGAGTTTAAG--GGTGAGACCAAGGTCTTCACTCCCGAAGAAATCTCCTCTATGATTATC 4779491
Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAAT 474744
| || ||||| | || || ||| ||| |||||| | || | || || || ||
Sbjct 4779490 ACAAAGATGAAGGAGACTGCTGAG-GGATACCTTGGAACTAAGGTGAACGACGCTGTCAT 4779432
Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804
||| ||||| || || || ||||||||||| || || || || || || || || ||
Sbjct 4779431 TACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACCAAGGACGCTGGTCTTAT 4779372
Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864
||| ||||| || ||| | || || || || || || || ||||| |||| || ||
Sbjct 4779371 TGCTGGTCTGAACGTTCAGAGAATCATCAACGAGCCTACCGCCGCCGCCATTGCCTACGG 4779312
Query 474865 TCTTGATAAGAA 474876
|||||| |||||
Sbjct 4779311 TCTTGACAAGAA 4779300
Score = 127 bits (140), Expect = 1e-23
Identities = 526/826 (64%), Gaps = 16/826 (2%)
Strand=Plus/Plus
Query 475364 GCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCAT 475421
|| || |||||||| | ||||| |||||||| || ||||| || |||| || | ||
Sbjct 7054 GCCACCGCTGGAGACACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCAC 7113
Query 475422 GGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAAC--ATCTGCTAAAGC 475479
| |||| | || || ||| | || | || || | || || | | || | ||
Sbjct 7114 --TTTGTTCAGGAGTTYAAGCGAAAGCACAAGAAGGACATCTCGACCAACCAGCGA--GC 7169
Query 475480 ATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCA 475539
| |||| || |||| |||||||| || ||||||||| |||| || ||| || ||||
Sbjct 7170 TCTYCGACGACTGCGAACCGCTTGTGAGCGAGCTAAGCGAACTCTCTCGTCTTCTGCTCA 7229
Query 475540 AACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAG 475599
|| | ||||| | || ||||| | || || ||||||| | || || || |
Sbjct 7230 GACCTCCATTGAAATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACCCG 7289
Query 475600 GGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACA 475659
|| ||| || || | ||| ||||| || || || |||| || ||||| |
Sbjct 7290 AGCCCGATTCGAGGAGCTCTGTCAGGATCTTTTCCGAGGCACTCTTGAGCCTGTTGAGAA 7349
Query 475660 AGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGG 475719
||||| | || | || | ||||| | ||| | || ||||| ||||| || ||
Sbjct 7350 GGTTCTGAAGGACGCCAAGATGGACAAGGCCTCCGTCAACGAGATTGTCCTTGTTGGTGG 7409
Query 475720 TTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGT 475778
|| || |||| || || | |||| | | | | | || || || || ||
Sbjct 7410 CTCCACTCGAATCCCCAAGGTCC-AGAAGCTCGTGTCTGACTTCTTCAACGGCAAGGAGC 7468
Query 475779 TAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTA 475838
| || | | || |||||||| |||||||| || |||||||| || || || ||||
Sbjct 7469 TGAACCGATCGATCAACCCTGATGAGGCTGTTGCCTACGGAGCTGCYGTYCAGGCTGCTA 7528
Query 475839 TTTTATCAGGTCAA---TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTC 475895
|| | || ||| | || | | | | | ||| | || |||| || |||
Sbjct 7529 TTCTRTCTGGTGAYACTTCYTCCTCTACYC---AGGAYATTCTGCTCCTTGAYGTTGCTC 7585
Query 475896 CACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATA 475955
| || || | ||| | || || | ||| || ||||||| || || || | ||||
Sbjct 7586 CTCTCTCTCTTGGTATCGAGACTGCTGGTGGTGTTATGACCAAGCTCATCCCCCGAAACT 7645
Query 475956 CTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTG 476015
| |||| || ||| || || | || ||||| || |||| || || | ||
Sbjct 7646 CGACTATTCCCACCAAGAAGTCTGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGTG 7705
Query 476016 TAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAA 476075
| ||||| |||| || ||||| || || || || || |||| ||||| |
Sbjct 7706 TTCTGATCCAGGTCTTCGAGGGTGAGCGAGCTCAGACCAAGGACAACAACATTCTTGGTA 7765
Query 476076 CTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTT 476135
||| | ||| ||||| ||||||||||| |||| |||||||| ||||| || || |
Sbjct 7766 AGTTTGAACTTTCTGGTATCCCTCCTGCTCCTCGAGGTGTTCCTCAGATTGAGGTCACCT 7825
Query 476136 TTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181
| ||| | || || || |||||||| || ||| | ||| ||| ||
Sbjct 7826 TCGATGTCGACGCCAACGGTATTCTCAACGTTTCCGCTGTTGAGAA 7871
Score = 118 bits (130), Expect = 7e-21
Identities = 326/494 (66%), Gaps = 10/494 (2%)
Strand=Plus/Plus
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
||| ||||| || ||||||||||| || || ||||||| || || | ||| | || ||
Sbjct 6468 AGTCGAAATCATCGCCAATGACCAGGGAAACCGAACAACTCCCTCGTTTGTGGCCTTCAC 6527
Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507
|| ||||||| || ||||| |||||||| || | || || || || |||| ||
Sbjct 6528 CGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCAGGCAGCCATGAACCCTGCAAA 6587
Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567
|| | ||||| || || || |||||||||| || ||||| ||| | |||||
Sbjct 6588 CACAGTCTTTGACGCCAAGCGACTGATTGGTCGAAAGTTTGACGATCCTGAGGTCCAGAA 6647
Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626
||| || | |||| ||| | || | | ||| || || | || || |
Sbjct 6648 TGACGCCAAGCACTTCYCTTTCAAGATTATCGACAAGGCTGGAAAGCCCAACATCGAGGT 6707
Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685
| | | | || || || || ||| | || ||| |||| || || ||| || |
Sbjct 6708 CGAGTTTAAG--GGCGAGACCAAGGTCTTTACTCCCGAAGAAATCTCCTCTATGATTCTC 6765
Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGA--CAAGAAGTAACTGATGCAGTA 474742
| || ||||| | || || ||| ||| |||||| |||| || | || || ||
Sbjct 6766 ACAAAGATGAAGGAGACTGCTGAG-GGATACCTTGGAACCAAG--GTGAACGACGCTGTC 6822
Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802
||||| ||||| || || || ||||||||||| || || || || || || || ||
Sbjct 6823 ATTACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACCAAGGACGCTGGTCTT 6882
Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862
||||| ||||| || || | || ||||| || || || || ||||| |||| ||
Sbjct 6883 ATTGCTGGTCTGAACGTCCAGAGAATCATTAACGAGCCTACCGCCGCCGCCATTGCCTAC 6942
Query 474863 GGTCTTGATAAGAA 474876
|| ||||| |||||
Sbjct 6943 GGCCTTGACAAGAA 6956
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268177441311068
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |