Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5 132 6e-26 >seq5 Length=2767003 Score = 132 bits (146), Expect = 6e-26 Identities = 346/520 (67%), Gaps = 16/520 (3%) Strand=Plus/Plus Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055 |||||| | || | || || || |||||||||| | ||||| | || ||| | | Sbjct 1872208 GCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATCTCC 1872267 Query 65056 -ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTT 65114 || | | ||| |||| | |||||| || | || ||||| || ||||| ||||| Sbjct 1872268 GACGACGAGTCGA-CCTTTGGCGAGCGGCTGATCGCCTTTGCCGCCGTCGAGGGCATCTT 1872326 Query 65115 CTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCT 65174 ||||||||| || ||| | | || | ||| | |||||||| ||||||||||| ||||| Sbjct 1872327 CTTCTCCGGCTCGTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCT 1872386 Query 65175 ATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGA 65234 |||||| || || || || |||||||| |||||||| ||| || |||||| Sbjct 1872387 CACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACCGACTTTGCCTGTCT 1872446 Query 65235 GCTCTTCAAG-ACTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAG 65293 ||||||| | || | | | || ||||| | | | | | || | | | | | | Sbjct 1872447 GCTCTTCTCGCACCTCGAG-AACCGACCCTCCAAGAAGATTGTCGAGGACGTGATTGTCG 1872505 Query 65294 AGGCGGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTA 65353 |||| |||| || ||| | | |||| | ||||| || || || || |||| | Sbjct 1872506 AGGCCGTTGGTATCGAGCAGGAGTTCCTGACCGACGCTCTGCCCTGCGGACTGCTCGGAA 1872565 Query 65354 TGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAG 65413 ||||| | || |||| | |||||||||||| ||| | || ||||| || | Sbjct 1872566 TGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGTCTGCT------GG 1872619 Query 65414 TTGGGGT--GCCAC-CCA---TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACA 65467 ||| | || || ||| | | ||| | | || || || ||||| ||||| |||| Sbjct 1872620 TTGCTCTCGGCAACTCCAAGGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACA 1872679 Query 65468 TTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGT 65507 | || | || |||||||||||||| |||||||| || Sbjct 1872680 TCTCGCTGGCCGGCAAGACCAACTTCTTCGAGAAGCGGGT 1872719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569294258080