Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq5 132 6e-26
>seq5
Length=2767003
Score = 132 bits (146), Expect = 6e-26
Identities = 346/520 (67%), Gaps = 16/520 (3%)
Strand=Plus/Plus
Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055
|||||| | || | || || || |||||||||| | ||||| | || ||| | |
Sbjct 1872208 GCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATCTCC 1872267
Query 65056 -ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTT 65114
|| | | ||| |||| | |||||| || | || ||||| || ||||| |||||
Sbjct 1872268 GACGACGAGTCGA-CCTTTGGCGAGCGGCTGATCGCCTTTGCCGCCGTCGAGGGCATCTT 1872326
Query 65115 CTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCT 65174
||||||||| || ||| | | || | ||| | |||||||| ||||||||||| |||||
Sbjct 1872327 CTTCTCCGGCTCGTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCT 1872386
Query 65175 ATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGA 65234
|||||| || || || || |||||||| |||||||| ||| || ||||||
Sbjct 1872387 CACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACCGACTTTGCCTGTCT 1872446
Query 65235 GCTCTTCAAG-ACTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAG 65293
||||||| | || | | | || ||||| | | | | | || | | | | | |
Sbjct 1872447 GCTCTTCTCGCACCTCGAG-AACCGACCCTCCAAGAAGATTGTCGAGGACGTGATTGTCG 1872505
Query 65294 AGGCGGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTA 65353
|||| |||| || ||| | | |||| | ||||| || || || || |||| |
Sbjct 1872506 AGGCCGTTGGTATCGAGCAGGAGTTCCTGACCGACGCTCTGCCCTGCGGACTGCTCGGAA 1872565
Query 65354 TGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAG 65413
||||| | || |||| | |||||||||||| ||| | || ||||| || |
Sbjct 1872566 TGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGTCTGCT------GG 1872619
Query 65414 TTGGGGT--GCCAC-CCA---TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACA 65467
||| | || || ||| | | ||| | | || || || ||||| ||||| ||||
Sbjct 1872620 TTGCTCTCGGCAACTCCAAGGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACA 1872679
Query 65468 TTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGT 65507
| || | || |||||||||||||| |||||||| ||
Sbjct 1872680 TCTCGCTGGCCGGCAAGACCAACTTCTTCGAGAAGCGGGT 1872719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569294258080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |