Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 5e-18
seq1 105 2e-17
>seq2
Length=4160336
Score = 107 bits (118), Expect = 5e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || || || || || ||||| | || ||||| ||| |||
Sbjct 1074826 CAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGAC 1074885
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || || |||||| |||||| ||
Sbjct 1074886 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAG 1074945
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|||||||||||||||| |||||| | || || || | || | | || |||||| ||
Sbjct 1074946 CGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTACAACATC 1075005
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||| ||||| ||||| || || ||| || |||| |||
Sbjct 1075006 CAGAAGGAGTCCACTCTCCATCTCGTTCTGCGACTCCGA 1075044
>seq1
Length=4858313
Score = 105 bits (116), Expect = 2e-17
Identities = 106/138 (77%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
|||||||| || || || |||||| |||||| || |||| || |||||||| |||
Sbjct 3613534 AAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGACTCATTTTCGCCGGTAAG 3613475
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | || || ||| | ||| || |||| |||||| ||||||| ||||||||||| ||
Sbjct 3613474 CAGCTCGAGGACGGACGAACTCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCAT 3613415
Query 206374 CTTGTTTTGAGACTTCGA 206391
|| ||| | ||||||||
Sbjct 3613414 CTGGTTCTCCGACTTCGA 3613397
Score = 102 bits (112), Expect = 2e-16
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || || ||||| || ||||| | || || || || ||
Sbjct 3612948 CAGATCTTTGTCAAGACCCTGACTGGAAAGACCATCACCCTCGAGGTTGAGTCCTCCGAT 3612889
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || || || ||| |||||| ||
Sbjct 3612888 ACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAGCAG 3612829
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||||||||||||| || |||||| | || || ||| | ||| || |||| |||||| ||
Sbjct 3612828 CGACTTATCTTCGCTGGTAAGCAGCTCGAGGACGGACGAACTCTGTCCGACTACAACATC 3612769
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||| ||||||||||| || || || | |||| |||
Sbjct 3612768 CAGAAGGAGTCTACTCTCCATCTGGTCCTCCGACTCCGA 3612730
Score = 98.7 bits (108), Expect = 2e-15
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || ||||| || ||||| | || || || ||||||||| ||||
Sbjct 3612708 AAGACCCTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCTTCTGACACTATCGACAAC 3612649
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || |||||| || |||||||||||
Sbjct 3612648 GTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGACTTATCTTC 3612589
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| |||||| | || || ||| | || | |||| |||||| ||||||| || ||
Sbjct 3612588 GCCGGTAAGCAGCTTGAGGACGGACGAACCCTCTCCGACTACAACATCCAGAAGGAATCC 3612529
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||| |||||||| | |||| |||
Sbjct 3612528 ACTCTCCACCTTGTGCTCCGACTCCGA 3612502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820179174761
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |