Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq6 167 3e-36 >seq6 Length=2636511 Score = 167 bits (184), Expect = 3e-36 Identities = 465/715 (65%), Gaps = 15/715 (2%) Strand=Plus/Plus Query 146803 TGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACC 146862 || || | ||| ||||| ||| |||||||||| | |||| || || || |||| | Sbjct 2518816 TGAGGCTTGTATCCCTCAAGGACAAAATCTTCATACTTGAAGTCATCGATATCCTTAATA 2518875 Query 146863 CGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGG 146922 ||| || | | ||| ||||| || ||| | | || | ||| ||||| Sbjct 2518876 TCCCTGGCAAAGGTCAACTTCGGGAACTCTCCGGGAGTTCGGGAAATCTGCTGCTTCAGA 2518935 Query 146923 GGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGC 146982 | |||||||| | ||| || || ||||| |||| ||| || | || || || Sbjct 2518936 GCGTCCACGTGATCCTTGTACACATGAGCGTCTCCCATGGTATGGATAAGCTCTCCACAG 2518995 Query 146983 TTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAG 147042 | || ||||||| ||||| | ||| || | ||| | ||| ||| ||||||||| Sbjct 2518996 TCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCATAGGAGGCAATGTTGAAG 2519055 Query 147043 GGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGC--TCCCC-- 147098 || || ||||| |||| || | |||| |||||||||||| ||||| ||| ||| | Sbjct 2519056 GGAACACCCAGACCCAGATCACATGACCGCTGGTACAGCTGACACGACAGCCGTCCTCGC 2519115 Query 147099 -----------GTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG 147147 || | |||||| |||||||| | |||||||| || || || ||||| Sbjct 2519116 TCAGAGTTCTTGTACGACACGTAGAACTGGCAGAACATGTGGCAGGGAGGAAGAGCCATT 2519175 Query 147148 GCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTC 147207 || |||||| |||||||||||||| || | | | || | | || ||||| | Sbjct 2519176 TTGGACAGGTCAGCGGGGTTCCAGGCTGACAGAATGATTCGACGGTCCTGAGGGTTGGTT 2519235 Query 147208 TTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCG 147267 || | | ||| ||| | ||||| ||||| |||||||| ||| | ||| | Sbjct 2519236 TTGAGAGTGTGGATCACCTGTTTGAGCTGATCCACACCCTGGCCAGTGTAATCTGTGTCA 2519295 Query 147268 CAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCG 147327 || ||| ||| ||| ||||| || | ||| |||||||| || || || |||||||| Sbjct 2519296 CAATCCTTGTATTCGGCTCCAAAATGACGCCATTGGAAGCCATATACAGGTCCCAGGTCT 2519355 Query 147328 CCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCC 147387 || ||| || || || ||| | |||||||| ||| || | ||||| Sbjct 2519356 CCCTCACGTCTATGTCCCAATCCAGCCTTTTCCAGAAACTCCTTGGATCCATTTCCGTCC 2519415 Query 147388 CAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAG 147447 || || | || || |||| ||| ||| || | || | |||||| Sbjct 2519416 CAAATATGAATGTTTTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCGGCCACAAACCAG 2519475 Query 147448 AGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502 || || ||||||||||| || | ||||||||| ||| ||||||| |||||||| Sbjct 2519476 AGAAGTTCCTCCAAAACGCCTCGGTAAAAGACCCGCTTTGTGGTCAACAGGGGGA 2519530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487700962400