Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq2 113 4e-20
seq3 95.1 1e-14
seq1 82.4 6e-11
>seq2
Length=4160336
Score = 113 bits (124), Expect = 4e-20
Identities = 257/386 (67%), Gaps = 3/386 (1%)
Strand=Plus/Minus
Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662
|| || ||| |||| ||||| || | |||| || ||||||| || ||||||| ||| |||
Sbjct 4110976 GGGCACTCGTTGGGGCACATGAGAGTCCACTCGGCGTTCTGCTCGACTCGCTCCATGAAC 4110917
Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722
| || || | ||| | || |||||||||| ||| |||| || ||||
Sbjct 4110916 AGGTCGGGGATCCAGAGAGCCAGGAACAGATCTCGGGCTCGGATCTCCTCCTTACCGTGG 4110857
Query 131723 AtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCC 131782
| ||| || | | || || || | ||| | |||||||| |||| |||| ||
Sbjct 4110856 TTCTTTCGCAGCTCGCAGAACTCGAAGACGTCATCGTGCCAGGGCTCCAGGTACATGGCA 4110797
Query 131783 ATTGCGCCTTTGCGCTTACCGCCT---TGATTAACATGACGAACCATGTTGTTGTATACG 131839
| || || ||||| |||| || | || | ||| | |||||||||| ||
Sbjct 4110796 AAGGCTCCGGGTCGCTTGTTGCCTCCCTGGTCGACGTATCGAGCGGTGTTGTTGTAGACA 4110737
Query 131840 CGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTG 131899
|||| ||||||| | | |||||||| | | || ||||| | ||||||| || ||
Sbjct 4110736 CGCAGCATGGGCACGATACCGTTGGAGGTACCGTTGGTTCCGGCAATGTAGGATCCGGTG 4110677
Query 131900 GCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCAT 131959
|||| ||| ||||| | | || ||||||||||| || | || ||||| || || ||
Sbjct 4110676 GCTCGGATGTTGTGGATGGACAGACCAATACCTCCAGCGGACTTGGAGATGAGAGCACAA 4110617
Query 131960 TTGGTTAGAGTGTTATAGATACCTTC 131985
| | || |||| ||||| || ||
Sbjct 4110616 GTCTTGAGGGTGTCGTAGATGCCGTC 4110591
>seq3
Length=2943663
Score = 95.1 bits (104), Expect = 1e-14
Identities = 217/320 (68%), Gaps = 9/320 (3%)
Strand=Plus/Plus
Query 131644 TTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTT 131703
||| || |||||||| |||| ||||||||||| || ||||| ||||| ||||| ||| |
Sbjct 1832199 TTCGACCCGCTTCATGAACAGGTCCGGCACCCACAATGCGTAGAACAGGTCTCTTGCTCT 1832258
Query 131704 TTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCA 131763
||||| |||| || |||| || || | || || | ||| || ||||||||
Sbjct 1832259 GTTCTCCTCTGCTCCGTGGTTTTTCCGCAGGTTCAGGAAATCGAGAATATCGGCATGCCA 1832318
Query 131764 GGGTTCCAAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACG 131820
||| |||| ||| | || | || || ||| || || || || | |||| ||
Sbjct 1832319 GGGCTCCAGATAGATGGCAAACGCTCCGGGACGCTTGTTTCCACCCTGGTCGACATACCG 1832378
Query 131821 AACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCT 131880
| |||||||| | || | | |||||| | | || ||| |||| | | |
Sbjct 1832379 TGCGGTGTTGTTGAACACCCTGAGCATGGGAACAATGCCACTGGACCTTCCTTGAGACCC 1832438
Query 131881 CTTAATG-TAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC-GCCG 131938
||||| |||| || ||||| ||||| || |||| | || || |||||||| ||||
Sbjct 1832439 AGTAATGATAGC-ACCCTTGGCCCTGATATTATGAATATGCAGACCGATACCTCCAGCCG 1832497
Query 131939 TATTTAGAGATTAGTGCGCA 131958
| ||| |||||| ||||||
Sbjct 1832498 T-TTTCGAGATT--TGCGCA 1832514
>seq1
Length=4858313
Score = 82.4 bits (90), Expect = 6e-11
Identities = 99/132 (75%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 96897 GGGTTTCATGTACACGAGTTTGGCGACACGAGCAACGGCTGCACTTCGGCCGGCGAACAT 96956
|| || || || ||||||||||| |||| | ||||||||||||||| || ||| ||
Sbjct 2020515 GGATTCCACGTCCACGAGTTTGGTGACAACACCAACGGCTGCACTTCTGCTGGCCCCCAC 2020456
Query 96957 TTCAACCC-TACATTGCAAAATCACGGCGCACCCAGCGCCATTGAACGCCACGTTGGTGA 97015
|||||||| | || | | || ||||| || |||| || | || || |||||||||||
Sbjct 2020455 TTCAACCCCTTCAA-GAAGAACCACGGTGCCCCCACCGACTCCGAGCGACACGTTGGTGA 2020397
Query 97016 TCTGGGCAACGT 97027
|| || |||||
Sbjct 2020396 CCTCGGAAACGT 2020385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934187665592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |