Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq5 122 3e-22
seq3 84.2 7e-11
>seq5
Length=2767003
Score = 122 bits (134), Expect = 3e-22
Identities = 401/608 (66%), Gaps = 19/608 (3%)
Strand=Plus/Plus
Query 443271 CGGTTCGTCTTGTTCCCCGTTCAGCATCCCGACATCTACGACATGTACAA-ACGACAAGT 443329
||||| || | |||||| | ||| | | ||| |||| | |||||||| | | | |
Sbjct 1871854 CGGTTTGTGCTCTTCCCCATCCAGTACCACGAGATCTGGCAGATGTACAAGAAGGCC-GA 1871912
Query 443330 GGCCCAGTTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGA 443389
||| || |||||| ||||||||||||||| ||||||| ||| ||| ||| | |
Sbjct 1871913 GGCTTCTTTCTGGACCGCCGAGGAGATTGATCTCGGCAAGGACATGGGCGACTGGGAGAA 1871972
Query 443390 ACGACTATCTAGCCATGAACGCGATTTCTTCAAAT-GCATCT--TGGCCTTCTTTGCACC 443446
|| || | | | || || ||||||| | ||| | ||||||||||||| |
Sbjct 1871973 CCGGCTCAACAACGACGAGCGG---TTCTTCATCTCGCACGTGCTGGCCTTCTTTGCTGC 1872029
Query 443447 GAGCGACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACAC 443506
||| ||||| || ||||| |||||| ||| |||| || ||| | | |
Sbjct 1872030 TTCCGATGGTATTGTGAACGAGAACCTGGTGGAGCGATTCTCCGGCGAGGTGCAGGTCCC 1872089
Query 443507 CGAGGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTA 443566
||||||| | |||||||| ||||| | ||||||||||| ||| | || ||
Sbjct 1872090 CGAGGCCAAGTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTA 1872149
Query 443567 CAGTCAGTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCC-ATCTTCTCAT 443625
| | | ||||| | ||| || || || || | | |||| || | || |||
Sbjct 1872150 CTCGCTGCTGATCGACACA-TACATC--AAGGACCCCAAGGAGCGAACCTACCTGTTCAA 1872206
Query 443626 CGT--TCATGACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGG--CTC 443681
|| || ||||| || |||||| | ||| | |||||| ||||| |||
Sbjct 1872207 CGCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATCTC 1872266
Query 443682 GAACGAGAAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTG 443741
|||| | || | ||| | |||||| || |||| ||||| | ||||| || |
Sbjct 1872267 CGACGACGAG-TCG-ACCTTTGGCGAGCGGCTGATCGCCTTTGCCGCCGTCGAGGGCATC 1872324
Query 443742 TTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGG 443801
|| || |||| | || ||||||||||||||| | || ||||| || || |||| |||
Sbjct 1872325 TTCTTCTCCGGCT-CGTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGG 1872383
Query 443802 TCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTG 443861
|| ||||| ||||| || ||| || ||||||||| |||| |||||| |||||
Sbjct 1872384 CCTCACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACCGACTTTGCCTG 1872443
Query 443862 TCTTCTCT 443869
||| ||||
Sbjct 1872444 TCTGCTCT 1872451
>seq3
Length=2943663
Score = 84.2 bits (92), Expect = 7e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 254972 GGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGC 255031
|||||| | || ||| || | |||||||||||| || || || ||||| || || ||
Sbjct 1832417 GGCATTGTTCCCATGCTCAGGGTGTTCAACAACACCGCACGGTATGTCGACCAGGGTGGA 1832358
Query 255032 GGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATT 255085
||| || || |||||||| ||||||| |||||||| ||||| ||||| |||
Sbjct 1832357 AACAAGCGTCCCGGAGCGTTTGCCATCTATCTGGAGCCCTGGCATGCCGATATT 1832304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588335165627245
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |