Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2 266 4e-66 seq5 134 2e-26 >seq2 Length=4160336 Score = 266 bits (294), Expect = 4e-66 Identities = 1149/1790 (64%), Gaps = 65/1790 (4%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| | ||| ||||||| ||| | ||||||| || || || |||||| | | Sbjct 4110405 CCCCAGCAGATGATCATGCGAGTGTCTGTCGGTATCCACGGCGACAACATTGCCCGAGCC 4110464 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| || | ||||| || | ||| |||| ||||| | || ||||| | Sbjct 4110465 ATTGAGACCTACAACTACATGTCTCAGAAGTAC-TTCACCCACGCTTCCCCTACCCTGTA 4110523 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| || || || || ||||| ||||| || |||||| || || ||||| || Sbjct 4110524 CAACGCAGGAACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTTGTCAACATGAAGGACGA 4110583 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| ||| |||| ||||| | || || | | ||||| | ||||| |||| ||||| Sbjct 4110584 CTCCATCGACGGCATCTACGACACCCTCAAGACTTGTGCTCTCATCTCCAAGTCCGCTGG 4110643 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 |||||||| || |||||| | | |||||| ||| ||| || || || Sbjct 4110644 AGGTATTGGTCTGTCCATCCACAACATCCGAGCCACCGGATCCTACATTGCCGGAACCAA 4110703 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 ||| || | ||||| | || ||||| || || | ||| ||| || || || || Sbjct 4110704 CGGTACCTCCAACGGTATCGTGCCCATGCTGCGTGTCTACAACAACACCGCTCGATACGT 4110763 Query 104581 AAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 | || ||| | | | ||| ||| | | || | || || ||||| |||| Sbjct 4110764 CGACCA----GGGAGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCTGGAGCCCTGGC 4110819 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 ||| || || | |||||| ||| |||| ||||| ||| | |||||| || Sbjct 4110820 ACGATGACGTCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGTAAGGAGGAGATCCGAG 4110879 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 ||| ||||| ||| ||||||||||| || || || |||||| || |||| ||| ||| Sbjct 4110880 CCCGAGATCTGTTCCTGGCTCTCTGGATCCCCGACCTGTTCATGGAGCGAGTCGAGCAGA 4110939 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGT---GG 104810 | | | ||| ||||| | || || || || ||||| || ||||| ||| | Sbjct 4110940 ACGCCGAGTGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCT---CGATGACGTCTACG 4110996 Query 104811 GTGAGGAGTTTGAAGC-CCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG 104869 |||| ||| || |||| || ||| |||||| |||||| || ||| |||| Sbjct 4110997 GTGACGAG-TTCAAGCAGCTGTACGAGCAGTACG----AGAAGGAGGGCCGAGGTCGAC- 4111050 Query 104870 GTGCCA--GCTGCC--GATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924 | ||| ||||| || | ||||| | ||||| | | || |||||| | |||| Sbjct 4111051 GAACCATCCCTGCCCAGAAGCTGTGGTACCACATTCTGGACTGCCAGACCGAGTCCGGTA 4111110 Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984 || | |||||| ||||| |||||||| |||| |||| || |||||||| ||||| Sbjct 4111111 ACCCCTTCATGCTCTACAAGGACGCCTGCAACCGAAAGTCCAACCAAAAGAACCTGGGTA 4111170 Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044 |||||| |||||| || ||| || || | || | | |||||| | Sbjct 4111171 CCATCAAGTCTTCCAACCTGTGTTGCGAGATTGTCGAGTACTCTTCTCCTGATGAGGTCG 4111230 Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCA---GAGACAAAGA 105101 |||| || ||||| || || |||||||| |||| | ||| || | ||||| || Sbjct 4111231 CTGTCTGCAACCTGGCTTCCATCGCTCTGCCCACCTTTGTCACTCGAGACGAGACCAACT 4111290 Query 105102 CATT---TGATTATGAAAAACTCCACGAAGTTACGAA---AACTGTCACCAAAAACCTAA 105155 | || || | | || || ||||| || | || | ||| |||||| | Sbjct 4111291 CCTTCTACGACTTCAAGAAGCTGCACGATATTGCCAAGGTGATTGT---GCGAAACCTCA 4111347 Query 105156 ACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGA 105212 || | ||||| |||| | ||||| || |||| || || || || ||| Sbjct 4111348 ACGCCATCATTGACCGAAACTACTACCCTGTCCCTGAG---GCCAAGAAGTCCAACATGC 4111404 Query 105213 GACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCC 105272 ||||||| || |||| ||| ||||| |||||||| || ||| ||||| || | Sbjct 4111405 GACACCGACCCATTGCTCTGGGTGTCCAGGGTCTGGCTGATACCTTCATGGCCCTCCGAC 4111464 Query 105273 ACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATC 105332 | || || ||||| || || ||| | |||| | || || |||||||| || | Sbjct 4111465 TGCCCTTCGAGTCCGAGGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGACCATCTACC 4111524 Query 105333 ACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTG 105392 ||| || ||||||| || ||| |||| | || ||| | || || ||||| Sbjct 4111525 ACGGTGCCGTTGAGGCTTCTTACGAGATGGCCCTTGAGGACGGTGCTTACGAGACCTTCC 4111584 Query 105393 AGGGTTCTCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGA----GAC 105447 |||| ||||| || || |||||| | || || ||||| ||| |||| |||| | Sbjct 4111585 AGGGCTCTCCTGCCTC-CAAGGGTGACCTGCAGTTTGACCTGT-GGAACGTGACTCCCTC 4111642 Query 105448 CAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAA 105507 | |||| || || ||||| | |||||||| |||| | ||| || | || || Sbjct 4111643 CGAGCT---CTGGGAGTGGGACGATCTCAAGGCCAAGATCATGAAGACTGGAATGCGAAA 4111699 Query 105508 CAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGA 105567 | || || |||| || ||||| || || ||||| | || || | || || || Sbjct 4111700 CTCGCTGCTGGTGGCCCCCATGCCTACTGCTTCCACTTCTCAGATTCTCGGCTTCAACGA 4111759 Query 105568 ATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTG 105626 ||||| || |||||||| | ||||| || ||| || || || || || ||||| Sbjct 4111760 GTGCTTCGAGCCCTACACCTCCAACATTTACTCT-CGACGAGTGCTTGCTGGTGAGTTCC 4111818 Query 105627 TGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATA 105686 |||||||||| || | | ||||| ||| ||||||| ||| | || | Sbjct 4111819 AGATTGTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTTGGTCTGTGGAACGAGACCA 4111878 Query 105687 TGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATG 105746 ||||| | | || ||| | || ||| | || || || | || || | | Sbjct 4111879 TGAAGAACCGAATCGTGGCCGACAACGGATCCGTGCAGAACATCCCCAACATCCCCCAGG 4111938 Query 105747 AAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGG 105806 | || ||| | ||||| || || ||||| || |||| |||| || |||| Sbjct 4111939 AGATCAAGGACCTGTACAAGACCGTGTGGGAGATTTCTCAGAAGCGAATCATCGAGATGG 4111998 Query 105807 CCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAG 105864 | || || || | ||||||||| | |||| ||| | || || ||| | Sbjct 4111999 CTGCCGACCGATCCCCCTTCATTGACC--AGTCCCAGTCCCTCAACATCCACATCAAGGA 4112056 Query 105865 TCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAAC 105924 || || ||| ||||||| |||| |||||| | ||| | ||||||||||||||||| || Sbjct 4112057 CCCCACCATGGGCAAGCTCACTTCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGAC 4112116 Query 105925 GGGGATGTATTACCTCCGATCTAAGGCAAAGGCGCGCCCAATTCAGTTCA 105974 || ||||| ||||| ||| | | ||| || ||| || ||||||| Sbjct 4112117 CGGTATGTACTACCTGCGAACCATGGCTGCTGCCGCCCCCATCCAGTTCA 4112166 >seq5 Length=2767003 Score = 134 bits (148), Expect = 2e-26 Identities = 172/235 (73%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 94723 GCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 94782 |||||| | || | || || || | ||||| || || ||||| | |||||| | | Sbjct 1872208 GCCATCGAGACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATC--T 1872265 Query 94783 ACAAAGTCGCGTT--CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCT 94840 | | | || || |||||| ||||| || |||| ||||| || ||||| |||| Sbjct 1872266 CCGACGACGAGTCGACCTTTGGCGAGCGGCTGATCGCCTTTGCCGCCGTCGAGGGCATCT 1872325 Query 94841 TCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 94900 ||||||| || || ||| | | || | |||||||||||||||||||||||||| || | Sbjct 1872326 TCTTCTCCGGCTCGTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCC 1872385 Query 94901 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 || ||||||||||||||| ||||| || |||||||| || ||| || ||||| Sbjct 1872386 TCACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACCGACTTTGC 1872440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260501078840