Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq2 297 2e-75
seq1 179 4e-40
seq3 132 5e-26
>seq2
Length=4160336
Score = 297 bits (328), Expect = 2e-75
Identities = 1133/1752 (65%), Gaps = 59/1752 (3%)
Strand=Plus/Minus
Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097
|| ||||| |||||||| || |||||||| ||||||||||||||||| | |||||| |||
Sbjct 4112137 GTTCGCAGGTAGTACATACCGGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAA 4112078
Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157
||||||| | | ||||||| || ||| |||||| || ||||| ||||| |||
Sbjct 4112077 GTGAGCTTGCCCATGGTGGGGTCCTTGATGTGGATGTTGAGGGACTGGGACTGGTCAATG 4112018
Query 80158 AAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTA 80217
|| | || || || ||||| || || ||| ||| || | ||| ||||| || ||
Sbjct 4112017 AAGGGGGATCGGTCGGCAGCCATCTCGATGATTCGCTTCTGAGAAATCTCCCACACGGTC 4111958
Query 80218 CGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGA---TTTTGCACACTGCCACCG 80271
|||| |||| | ||||| || |||| | || ||||| || |
Sbjct 4111957 TTGTACAGGTCCTTG---ATCTCCTGGGGGATGTTGGGGATGTTCTGCACGGATCCGTTG 4111901
Query 80272 TCCTTTACAATTTGATTTTTCAATTCAGACGT-CCAGACACCAAGCTTGTGCAGATCTTT 80330
|| || ||| | || |||| | ||| ||| | ||||| || ||| || ||
Sbjct 4111900 TCGGCCACGATTCGGTTCTTCA-TGGTCTCGTTCCACAGACCAACCTCAACCAGGTCCTT 4111842
Query 80331 CACAAG---GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGA-TACA 80386
| || | | ||| |||| || |||| || || || || || ||| || |
Sbjct 4111841 GAGCAGCCAGGGGTTGACAATCTGGA---ACTCACCAGCAAGCACTCGTCG-AGAGTAAA 4111786
Query 80387 GGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCG 80446
||| | ||||| ||||| || ||||||| ||||| ||||||| ||| || |
Sbjct 4111785 TGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGAGAAGTGGAAGCAG 4111726
Query 80447 TCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATAT---CCTCGC 80503
| ||||| ||| | |||| ||| || || |||| || |||| |||| | ||| |
Sbjct 4111725 TAGGCATGGGGGCCACCAGCAGCGAGTTTCGCATTCCAGTCTTCATGATCTTGGCCTTGA 4111666
Query 80504 GCAAATCTGACCAAAAATCAA--CCCCAACGCTGTGACC--CCACATGTCGTGCTGCAAG 80559
| ||| | || | || | | | | || || ||||| ||| ||||| |
Sbjct 4111665 G---ATC-GTCCCACTCCCAGAGCTCGGAGGGAGTCACGTTCCACAGGTCAAACTGCAGG 4111610
Query 80560 ATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGC 80619
|||| || || ||||| ||| ||| |||||||| | || ||| ||||| |
Sbjct 4111609 TCACCCTTGGAGGCAGGAGAGCCCTGGAAGGTCTCGTAAGCACCGTCCTCAAGGGCCATC 4111550
Query 80620 TCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCA-CACC 80678
|| | || || || ||| |||| || ||| ||| |||| |||| | | |
Sbjct 4111549 TCGTAAGAAGCCTCAACGGCACCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTC 4111490
Query 80679 GCGCGCCTG-TGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCT 80737
| |||| | || | ||||| | || | | |||||| |||||||| ||||
Sbjct 4111489 TTG-GCCTCCTCGGAC-TCGAAGGGCAGTCGGAGGGCCATGAAGGTATCAGCCAGACCCT 4111432
Query 80738 GAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGT 80797
| || || | || || || ||||| ||| |||| || || |||||| || | ||||
Sbjct 4111431 GGACACCCAGAGCAATGGGTCGGTGTCGCATGTTGGACTTCTTGGCCTCAGGGACAGGGT 4111372
Query 80798 AAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAA 80857
| |||| || |||| | ||| ||||| || || ||| | || ||| || |
Sbjct 4111371 AGTAGTTTCGGTCAATGATGGCGTTGAGGTTTCGCACAATCACCTTGGCAATATCGTGCA 4111312
Query 80858 GTTTCTGAAAGTCGAA-------TTGGT-TCCCCT----TCACAAATGCCGGAAGGCTCA 80905
| |||| |||||| | ||||| || || | ||||| | || || |
Sbjct 4111311 GCTTCTTGAAGTCGTAGAAGGAGTTGGTCTCGTCTCGAGTGACAAAGGTGGGCAGAGCGA 4111252
Query 80906 GGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGC 80965
||| ||||| ||||| || || ||||| |||| | | ||||||| || || |
Sbjct 4111251 TGGAAGCCAGGTTGCAGACAGCGACCTCATCAGGAGAAGAGTACTCGACAATCTCGCAAC 4111192
Query 80966 ACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGT 81025
||| || |||||||| || ||||||||||| || ||||| ||||| |||||| ||||
Sbjct 4111191 ACAGGTTGGAAGACTTGATGGTACCCAGGTTCTTTTGGTTGGACTTTCGGTTGCAGGCGT 4111132
Query 81026 CCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAA 81085
|||||||| |||| | ||| |||||| |||| ||| | | || ||| || ||| |
Sbjct 4111131 CCTTGTAGAGCATGAAGGGGTTACCGGACTCGGTCTGGCAGTCCAGAATGTGGTACCACA 4111072
Query 81086 TCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCT 81144
|| | || || || | ||| || | | |||| |||| ||||
Sbjct 4111071 GCTTCTGGGCAGGGATGGTTCGTCGACCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCT 4111012
Query 81145 TCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGG 81204
| | ||||| | |||||| | ||| |||| | ||||||||||| |||||||| ||
Sbjct 4111011 GCTT-GAACTCGTCACCGTAGACGTCATCGAGGCCAGGGCACTCGTTGGGGCACATGAGA 4110953
Query 81205 TGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTG 81264
||| |||| || | ||| || || |||||| ||| ||||||||||| || |
Sbjct 4110952 GTCCACTCGGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCAGAGAGCCAGG 4110893
Query 81265 AACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCC 81324
||||| || ||| || |||||| | ||| ||||| |||| |||| || ||
Sbjct 4110892 AACAGATCTCGGGCTCGGATCTCCTCCTTACCGTGGTTCTTTCGCAGCTCGCAGAACTCG 4110833
Query 81325 ATGATGTCCGCATGCCATGGCTCCAGATACACGGC----GATC--GACCCCTTGCGACGG 81378
| || ||| | ||||| |||||||| |||| ||| | || | | |||| |
Sbjct 4110832 AAGACGTCATCGTGCCAGGGCTCCAGGTACATGGCAAAGGCTCCGGGTCGCTTG---TTG 4110776
Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438
|| ||||||| |||||| || || || ||| | ||||||| ||| || | ||||||
Sbjct 4110775 CCTCCCTGGTCGACGTATCGAGCGGTGTTGTTGTAGACACGCAGCATGGGCACGATACCG 4110716
Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAA 81498
| || |||||| || || | || || || |||| || | ||| ||| ||
Sbjct 4110715 TTGGAGGTACCGTTGGTTCCGGCAATGTAGGATCCGGTGGCTCGGATGTTGTGGATGGAC 4110656
Query 81499 AGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATT 81558
||||| || || || | |||| || || ||||||| || | ||| || || ||
Sbjct 4110655 AGACCAATACCTCCAGCGGACTTGGAGATGAGAGCACAAGTCTTGAGGGTGTCGTAGATG 4110596
Query 81559 CCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCT-TTT 81617
|| |||||| || | ||||||| | | |||||| |||||||| |||||
Sbjct 4110595 CCGTCGATGGAGTCGTCCTTCATGTTGACAAGGAAACACGACGACATCTG-GGGCTGGGG 4110537
Query 81618 TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTC 81677
| || || ||| |||| || |||| ||||| |||| || | ||||| ||
Sbjct 4110536 GGTTCCTGCGTTGTACAGGGTAGGGGAAGCGTGGGTGAAGTACTTCTGAGACATGTAGTT 4110477
Query 81678 ATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAA 81737
||||| || || | || | ||| | ||| ||||| ||||||| || || ||||| |
Sbjct 4110476 GTAGGTCTCAATGGCTCGGGCAATGTTGTCGCCGTGGATACCGACAGACACTCGCATGAT 4110417
Query 81738 CATGTACTGGGG 81749
||| | ||||||
Sbjct 4110416 CATCTGCTGGGG 4110405
Score = 187 bits (206), Expect = 3e-42
Identities = 178/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || ||||||||||| |||||||| |||||||| || |||||||| |||||
Sbjct 1074822 AATGCAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTTC 1074881
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||| | || | ||| | || || |||||||||||||||||||| || |||||
Sbjct 1074882 CGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 1074941
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||||| || || || || |||||||| |||||||| | || ||||| | ||||| ||
Sbjct 1074942 GCAGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTACAA 1075001
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| |||||||| ||||| || |||| || || |||||
Sbjct 1075002 CATCCAGAAGGAGTCCACTCTCCATCTCGTTCTGCGACTCCGAGGTGG 1075049
Score = 174 bits (192), Expect = 2e-38
Identities = 174/226 (77%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 27407 TGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTG 27466
||||||||||||||||||| ||||| |||||||| || || || ||||| ||||| |
Sbjct 1737019 TGCAAATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCG 1736960
Query 27467 ATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGC 27526
| | ||||| || | ||| | || || |||||||||||||| ||||| || |||||||
Sbjct 1736959 ACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGC 1736900
Query 27527 AGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATG 27586
|||| || ||||| || || ||||| |||||||| | || || || | ||||| ||
Sbjct 1736899 AGCGACTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCTGACTACAACA 1736840
Query 27587 TCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| |||||||| || || ||| |||| || || || ||
Sbjct 1736839 TCCAGAAGGAGTCCACTCTGCACCTTGTCCTGCGACTCCGAGGAGG 1736794
>seq1
Length=4858313
Score = 179 bits (198), Expect = 4e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || || ||||| || || || |||||||||||
Sbjct 3612951 ATGCAGATCTTTGTCAAGACCCTGACTGGAAAGACCATCACCCTCGAGGTTGAGTCCTCC 3612892
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| || | ||| | || ||||||||||||||||| ||||| || ||||||
Sbjct 3612891 GATACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAG 3612832
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || ||||||||||| |||||||| | || || || | ||||| ||
Sbjct 3612831 CAGCGACTTATCTTCGCTGGTAAGCAGCTCGAGGACGGACGAACTCTGTCCGACTACAAC 3612772
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || ||||| ||||| ||| | || || || |||||
Sbjct 3612771 ATCCAGAAGGAGTCTACTCTCCATCTGGTCCTCCGACTCCGAGGTGG 3612725
Score = 158 bits (174), Expect = 1e-33
Identities = 155/200 (78%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| || || || ||||| || ||||| |||||||||||
Sbjct 3613390 ATGCAGATTTTCGTGAAGACCCTCACTGGAAAGACCATCACTCTCGAGGTTGAGTCCTCC 3613331
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| || | ||| | || || |||||||||||||| ||||| || ||||||
Sbjct 3613330 GATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 3613271
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || ||||| ||||||||||| || ||||||| || ||||| | ||||| ||
Sbjct 3613270 CAGCGACTCATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGAACCCTCTCTGACTACAAC 3613211
Query 27586 GTCCAAAAGGAATCCACTCT 27605
|||| ||||| || |||||
Sbjct 3613210 ATCCAGAAGGAGTCTACTCT 3613191
Score = 149 bits (164), Expect = 7e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| |||||||| ||||| || || || ||||| ||||| |
Sbjct 3612723 ATGCAGATTTTCGTGAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCTTCT 3612664
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || || |||||||||||||| || || || ||||||
Sbjct 3612663 GACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 3612604
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || |||||||| || ||||| | || ||||| | ||||| ||
Sbjct 3612603 CAGCGACTTATCTTCGCCGGTAAGCAGCTTGAGGACGGACGAACCCTCTCCGACTACAAC 3612544
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| |||||||||||||| || || || | || || || ||||| ||
Sbjct 3612543 ATCCAGAAGGAATCCACTCTCCACCTTGTGCTCCGACTCCGAGGTGGCCA 3612494
Score = 129 bits (142), Expect = 7e-25
Identities = 118/149 (79%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543
||| | || ||||||||||||||||||||||| || ||||||||||| || ||||| ||
Sbjct 3613540 AAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGACTCATTTTCGCC 3613481
Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603
|||||||| |||||||| | || || || | ||||| || |||| ||||| || |||
Sbjct 3613480 GGTAAGCAGCTCGAGGACGGACGAACTCTGTCCGACTACAACATCCAGAAGGAGTCTACT 3613421
Query 27604 CTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||||| || | || ||||| |||||
Sbjct 3613420 CTCCATCTGGTTCTCCGACTTCGAGGTGG 3613392
>seq3
Length=2943663
Score = 132 bits (146), Expect = 5e-26
Identities = 145/193 (75%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 80908 GACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCAC 80967
|||||||| |||||||| ||||||||||| | | ||| ||||||||||||||||
Sbjct 1831885 GACGCCAGGTTGCACACCGCCACCTCTTCGGGTGACGAGTACTGGACGATTTCCGTGCAC 1831944
Query 80968 AAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCC 81027
| ||| || ||||| || || |||||||| | |||||| ||||| |||||||| ||||
Sbjct 1831945 AGATTCGACGACTTGATGGTGCCCAGGTTCTGCTGGTTGGACTTTGCGTTGCAGCTGTCC 1832004
Query 81028 TTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATC 81087
|||||| |||| |||| ||||| |||| ||| | ||||||| || | | | |
Sbjct 1832005 TTGTAGAGCATGAACGGTCCTCCGGTTTCGATCTGACTCGTGAGGATCGCCTTGAACAGC 1832064
Query 81088 TCGCGCGCCTTGA 81100
|| |||| ||||
Sbjct 1832065 TCCTGCGCGTTGA 1832077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310107715920
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