Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 4e-13 >seq6 Length=2636511 Score = 89.7 bits (98), Expect = 4e-13 Identities = 182/268 (68%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 118782 CTGATCCACACCCTTTCCAGTATACTGAGACTCGCATCCTTTATATTCTGCCCCAAAAAA 118841 |||||||||||||| ||||| || | | || || | || ||||| || |||||| Sbjct 2519262 CTGATCCACACCCTGGCCAGTGTAATCTGTGTCACAATCCTTGTATTCGGCTCCAAAATG 2519321 Query 118842 TCTCCATTGAAAACCATAAACAGGCCCCAGATCTCCCTGGGACCTAAAATCTAAACCTAC 118901 | |||||| || ||||| ||||| ||||| ||||||| ||| | || || | Sbjct 2519322 ACGCCATTGGAAGCCATATACAGGTCCCAGGTCTCCCTCACGTCTATGTCCCAATCCAGC 2519381 Query 118902 TTTTCTCTGAAATTCTTTTGACCCATTAGCATTCCAAATAGCAACTCCtttttttGC-CA 118960 ||| | |||| || || || ||||| | | ||||||| || | |||||| || || Sbjct 2519382 CTTTTCCAGAAACTCCTTGGATCCATTTCCGTCCCAAATATGAA-TGTTTTTTTCGCTCA 2519440 Query 118961 GATCATTAGAGTTTGTAGAACCACTTAAAAACCAAAGAAGCTCCTCAACAACGCCTCTCC 119020 | | || || ||| | || | |||||| ||||| ||||| | |||||||| Sbjct 2519441 GCTTCTTGCCGTCGGTACATCCGGCCACAAACCAGAGAAGTTCCTCCAAAACGCCTCGGT 2519500 Query 119021 AAAAAACTGTTTTTGTTGTAAACAGTGG 119048 |||| || ||||| || ||||| || Sbjct 2519501 AAAAGACCCGCTTTGTGGTCAACAGGGG 2519528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414476592891124