Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_029255.1
Length=129563
Score E
Sequences producing significant alignments: (Bits) Value
seq6 89.7 4e-13
>seq6
Length=2636511
Score = 89.7 bits (98), Expect = 4e-13
Identities = 182/268 (68%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 118782 CTGATCCACACCCTTTCCAGTATACTGAGACTCGCATCCTTTATATTCTGCCCCAAAAAA 118841
|||||||||||||| ||||| || | | || || | || ||||| || ||||||
Sbjct 2519262 CTGATCCACACCCTGGCCAGTGTAATCTGTGTCACAATCCTTGTATTCGGCTCCAAAATG 2519321
Query 118842 TCTCCATTGAAAACCATAAACAGGCCCCAGATCTCCCTGGGACCTAAAATCTAAACCTAC 118901
| |||||| || ||||| ||||| ||||| ||||||| ||| | || || |
Sbjct 2519322 ACGCCATTGGAAGCCATATACAGGTCCCAGGTCTCCCTCACGTCTATGTCCCAATCCAGC 2519381
Query 118902 TTTTCTCTGAAATTCTTTTGACCCATTAGCATTCCAAATAGCAACTCCtttttttGC-CA 118960
||| | |||| || || || ||||| | | ||||||| || | |||||| || ||
Sbjct 2519382 CTTTTCCAGAAACTCCTTGGATCCATTTCCGTCCCAAATATGAA-TGTTTTTTTCGCTCA 2519440
Query 118961 GATCATTAGAGTTTGTAGAACCACTTAAAAACCAAAGAAGCTCCTCAACAACGCCTCTCC 119020
| | || || ||| | || | |||||| ||||| ||||| | ||||||||
Sbjct 2519441 GCTTCTTGCCGTCGGTACATCCGGCCACAAACCAGAGAAGTTCCTCCAAAACGCCTCGGT 2519500
Query 119021 AAAAAACTGTTTTTGTTGTAAACAGTGG 119048
|||| || ||||| || ||||| ||
Sbjct 2519501 AAAAGACCCGCTTTGTGGTCAACAGGGG 2519528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414476592891124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |