Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1 89.7 3e-13
>seq1
Length=4858313
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||||| || ||||| || ||||| ||||| || || || |
Sbjct 3612723 ATGCAGATTTTCGTGAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCTTCT 3612664
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| | || | | || || || ||||| || ||| | || || || ||
Sbjct 3612663 GACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 3612604
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || || ||||| || || || || |||| ||| || | ||| ||||||
Sbjct 3612603 CAGCGACTTATCTTCGCCGGTAAGCAGCTTGAGGACGGACGAACCCTCTCCGACTACAAC 3612544
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || || |||||
Sbjct 3612543 ATCCAGAAGGAATCCAC 3612527
Score = 82.4 bits (90), Expect = 5e-11
Identities = 139/201 (69%), Gaps = 8/201 (4%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || |||||||| ||||| || ||||||||||| ||||| ||| |
Sbjct 3613390 ATGCAGATTTTCGTGAAGACCCTCACTGGAAAGACCATCACTCTCGAGGTTGAGTCCTCC 3613331
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || |||| | | || || || ||||| || || | || || || ||
Sbjct 3613330 GATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 3613271
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGA----CGAACGCACTTTAGGCGATTA 23786
||||| | || || || || || || || || || ||||| | || | || ||
Sbjct 3613270 CAGCGACTCATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGAACCCTCTCT----GACTA 3613215
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || || ||||| ||
Sbjct 3613214 CAACATCCAGAAGGAGTCTAC 3613194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009431100828
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |