Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 3e-13 >seq1 Length=4858313 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||| || ||||| || ||||| ||||| || || || | Sbjct 3612723 ATGCAGATTTTCGTGAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCTTCT 3612664 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| | || | | || || || ||||| || ||| | || || || || Sbjct 3612663 GACACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 3612604 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || ||||| || || || || |||| ||| || | ||| |||||| Sbjct 3612603 CAGCGACTTATCTTCGCCGGTAAGCAGCTTGAGGACGGACGAACCCTCTCCGACTACAAC 3612544 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || ||||| Sbjct 3612543 ATCCAGAAGGAATCCAC 3612527 Score = 82.4 bits (90), Expect = 5e-11 Identities = 139/201 (69%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || |||||||| ||||| || ||||||||||| ||||| ||| | Sbjct 3613390 ATGCAGATTTTCGTGAAGACCCTCACTGGAAAGACCATCACTCTCGAGGTTGAGTCCTCC 3613331 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | || || || ||||| || || | || || || || Sbjct 3613330 GATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 3613271 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGA----CGAACGCACTTTAGGCGATTA 23786 ||||| | || || || || || || || || || ||||| | || | || || Sbjct 3613270 CAGCGACTCATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGAACCCTCTCT----GACTA 3613215 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || || ||||| || Sbjct 3613214 CAACATCCAGAAGGAGTCTAC 3613194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009431100828