Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq3 84.2 2e-11
>seq3
Length=2943663
Score = 84.2 bits (92), Expect = 2e-11
Identities = 134/186 (72%), Gaps = 10/186 (5%)
Strand=Plus/Plus
Query 53493 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCATC-C 53551
||||||||||| | || | ||| ||| | ||| |||| || ||||||||||| || |
Sbjct 394723 TCGTCAAGGTGCGAATGCGAACCACCAAGATCCCCCAGATTGGAGACAAGTTTGCCTCGC 394782
Query 53552 TTCACGGCGCAAAAGGGGACATGCGGAGCG--GTCCTGACTCAGGAGGACATGCCCTT-- 53607
|||||| || ||||| || || | | || | ||| | ||||| ||||| ||
Sbjct 394783 GTCACGGA-CAGAAGGGTACCATTGGTGTGACGTACCGACAC--GAGGATATGCCGTTTT 394839
Query 53608 CGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGAT 53667
|| | || || | |||||||| |||||||||||||||||||| ||||||| | ||
Sbjct 394840 CGGCC--GAGGGTATCGTGCCCGATATCATCATCAACCCCCACGCCATTCCCTCGCGTAT 394897
Query 53668 GACGGT 53673
||| ||
Sbjct 394898 GACCGT 394903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406162997045326
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |