Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016- 03-01] 41 sequences; 21,900,276 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 2e-11 >seq3 Length=2943663 Score = 84.2 bits (92), Expect = 2e-11 Identities = 134/186 (72%), Gaps = 10/186 (5%) Strand=Plus/Plus Query 53493 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCATC-C 53551 ||||||||||| | || | ||| ||| | ||| |||| || ||||||||||| || | Sbjct 394723 TCGTCAAGGTGCGAATGCGAACCACCAAGATCCCCCAGATTGGAGACAAGTTTGCCTCGC 394782 Query 53552 TTCACGGCGCAAAAGGGGACATGCGGAGCG--GTCCTGACTCAGGAGGACATGCCCTT-- 53607 |||||| || ||||| || || | | || | ||| | ||||| ||||| || Sbjct 394783 GTCACGGA-CAGAAGGGTACCATTGGTGTGACGTACCGACAC--GAGGATATGCCGTTTT 394839 Query 53608 CGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGAT 53667 || | || || | |||||||| |||||||||||||||||||| ||||||| | || Sbjct 394840 CGGCC--GAGGGTATCGTGCCCGATATCATCATCAACCCCCACGCCATTCCCTCGCGTAT 394897 Query 53668 GACGGT 53673 ||| || Sbjct 394898 GACCGT 394903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162997045326