Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq5 167 2e-36
>seq5
Length=2767003
Score = 167 bits (184), Expect = 2e-36
Identities = 565/872 (65%), Gaps = 15/872 (2%)
Strand=Plus/Minus
Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316
|| ||||| ||||| || ||||| |||||||| || || ||||| | | ||| || ||
Sbjct 1872734 TTCTGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTC 1872675
Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTT---AGAGCTACA 4373
||||| || || || || || || | |||||| || | || ||||| ||
Sbjct 1872674 TCCATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTGG---AGTTGCCGAGAGCAACC 1872618
Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433
|||| ||||| || ||||| || || ||||||| |||||| | | ||| ||||| |
Sbjct 1872617 AGCAGACGGTCGGCGACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATTCCGAGC 1872558
Query 4434 AATCTCACAGGT-AGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGAT 4492
| || | |||| || |||| |||| ||||| || || ||| ||||| || ||
Sbjct 1872557 AGTC-CGCAGGGCAGAGCGTCGGTCAGGAACTCCTGCTCGATACCAACGGCCTCGACAAT 1872499
Query 4493 TATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGC 4552
| || | | | | || || ||| || | | || || | | ||| ||
Sbjct 1872498 CACGTCCTCGACAATCTTCTTGGAGGGTCGGTTCTCGAGGTGCGAGAAGAGCAGACAGGC 1872439
Query 4553 AAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGG 4612
||| || |||| ||| ||||||| | || || ||||| || || || | |||||
Sbjct 1872438 AAAGTCGGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGG 1872379
Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCC 4672
||| | ||||| ||| || ||||| || || | ||| || || || || ||||| |||||
Sbjct 1872378 CATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCGGAGAAGAAGATGCC 1872319
Query 4673 TTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCT--TTGTCTTTAATC 4730
|| ||||||||||| || | | | | | | | || | | | || | ||| |||
Sbjct 1872318 CTCGACGGCGGCAAAGGCGA-TCAGCCGCTCGCCAAAG-GTCGACTCGTCGTCGGAGATC 1872261
Query 4731 CATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAAT 4790
|| || | ||||||| || || ||||| | ||| || || || | || ||||| ||
Sbjct 1872260 CACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCGTTGAAC 1872201
Query 4791 AATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCA 4850
| | || || ||||| | || || ||||| || || || ||| ||||
Sbjct 1872200 AGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTACGTTTCC 1872141
Query 4851 GAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGA 4910
|| || || || || || ||||| || ||||| ||||| | || || | || ||
Sbjct 1872140 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGACCTGC 1872081
Query 4911 ACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAA 4970
|| ||| | |||| || || | ||| ||||| || ||||| || || |||||
Sbjct 1872080 ACCTCGCCGGAGAATCGCTCCACCAGGTTCTCGTTCACAATACCATCGGAAGCAGCAAAG 1872021
Query 4971 AACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAA---GTTTTTTCCAGTGG 5027
|| |||| || || || || ||| || | ||||| || | | || | ||||| |
Sbjct 1872020 AAGGCCAGCACGTGCGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGGTTCTCCCAGTCG 1871961
Query 5028 GGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTG 5087
|| || || | ||||| || || | ||||| || || || || || || |||
Sbjct 1871960 CCCATGTCCTTGCCGAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTG 1871901
Query 5088 TACATAGACCAAATATCAGGATACTGAATCGG 5119
||||| ||| || || | ||||| || ||
Sbjct 1871900 TACATCTGCCAGATCTCGTGGTACTGGATGGG 1871869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049386608653
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |