Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq6 194 1e-44
seq3 93.3 3e-14
>seq6
Length=2636511
Score = 194 bits (214), Expect = 1e-44
Identities = 408/605 (67%), Gaps = 25/605 (4%)
Strand=Plus/Plus
Query 27138 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 27197
|||||| | |||||||||||| ||| || ||||||||||||| ||| |||| || |||
Sbjct 2518929 CTTCAGAGCGTCCACGTGATCCTTGTACACATGAGCGTCTCCCATGGTATGGATAAGCTC 2518988
Query 27198 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 27257
||| || || |||| || || || ||||| || | |||| ||| ||| ||
Sbjct 2518989 TCCACAGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCATAGGAGGCAAT 2519048
Query 27258 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTC 27317
||| ||||| || || || |||| || | |||| |||||| ||||||||||| |||
Sbjct 2519049 GTTGAAGGGAACACCCAGACCCAGATCACATGACCGCTGGTACAGCTGACACGACAGCCG 2519108
Query 27318 TCCATCGCTTA----------------CGTAAAACTGACATATGGCGTGGCACGGAGGAA 27361
||| ||||| | |||| ||||| || | |||||| |||||||
Sbjct 2519109 TCC-TCGCTCAGAGTTCTTGTACGACACGTAGAACTGGCAGAACATGTGGCAGGGAGGAA 2519167
Query 27362 GAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTG 27421
||||||| | || ||| |||||||||||| ||| ||||| || | ||| | |
Sbjct 2519168 GAGCCATTTTGGACAGGTCAGCGGGGTTCCAGGCTGACAGAATGATTCGACGGTCCTGAG 2519227
Query 27422 GGTTGTTCCTGA---TGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGT 27478
||||| | ||| || || ||| | |||| ||||||||||| ||| || | ||
Sbjct 2519228 GGTTGGTTTTGAGAGTGTGGATCAC--CTGTTTG-AGCTGATCCACACCCTGGCCAGTGT 2519284
Query 27479 AGTCTACCCTCATG-TCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACC 27537
| ||| ||| ||| |||| || ||||| ||||| | ||||||||| || || ||
Sbjct 2519285 AATCTGTG-TCACAATCCTTGTATTCGGCTCCAAAATGACGCCATTGGAAGCCATATACA 2519343
Query 27538 GGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAA 27597
||||||||||||||||| || || | || || ||| |||| ||| || ||||
Sbjct 2519344 GGTCCCAGGTCTCCCTCACGTCTATGTCCCAATCCAGCCTTTTCCAGAAACTCCTTGGAT 2519403
Query 27598 CCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCT 27657
|| || ||||||| || | | || ||| |||| ||| || || | ||
Sbjct 2519404 CCATTTCCGTCCCAAATATGAATGTTTTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCG 2519463
Query 27658 CTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGG 27717
|| ||||| || || ||||||| ||| | ||||||||| ||| || || |
Sbjct 2519464 GCCACAAACCAGAGAAGTTCCTCCAAAACGCCTCGGTAAAAGACCCGCTTTGTGGTCAAC 2519523
Query 27718 AGGGG 27722
|||||
Sbjct 2519524 AGGGG 2519528
>seq3
Length=2943663
Score = 93.3 bits (102), Expect = 3e-14
Identities = 136/186 (73%), Gaps = 10/186 (5%)
Strand=Plus/Plus
Query 48509 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTC-C 48567
||||||||||| | || | ||| ||| | ||| |||| || ||||||||||| || |
Sbjct 394723 TCGTCAAGGTGCGAATGCGAACCACCAAGATCCCCCAGATTGGAGACAAGTTTGCCTCGC 394782
Query 48568 TTCACGGCGCAAAAGGGGACATGTGGAGC--CGTCCTGACCCAGGAGGACATGCCCTT-- 48623
|||||| || ||||| || ||| | ||| | ||| | ||||| ||||| ||
Sbjct 394783 GTCACGGA-CAGAAGGGTACCATTGGTGTGACGTACCGACAC--GAGGATATGCCGTTTT 394839
Query 48624 CGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGAT 48683
|| | || || | |||||||| |||||||||||||||||||| ||||||| | ||
Sbjct 394840 CGGCC--GAGGGTATCGTGCCCGATATCATCATCAACCCCCACGCCATTCCCTCGCGTAT 394897
Query 48684 GACCGT 48689
||||||
Sbjct 394898 GACCGT 394903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369507015361871
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |