Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq2 163 6e-35
seq1 158 3e-33
seq5 111 3e-19
>seq2
Length=4160336
Score = 163 bits (180), Expect = 6e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || || ||||| | ||| || || ||||||||||||||||
Sbjct 1075050 ACCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1074991
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||| ||||| || || || ||||| ||||| | || || ||||| ||
Sbjct 1074990 AAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 1074931
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||| | || ||| | ||||| ||||| |||| || ||
Sbjct 1074930 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 1074871
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTT 283101
|| || ||||| |||||||| || | ||||| || || ||||||||||
Sbjct 1074870 CTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 1074821
Score = 140 bits (154), Expect = 7e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || || || || || || || || | ||| || || ||||||||||||||||
Sbjct 1736793 ACCTCCTCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1736852
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||| ||||| || || || ||||| || |||| || || ||||| ||
Sbjct 1736853 AAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGG 1736912
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||| | || ||| | || || ||||| |||| || ||
Sbjct 1736913 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCAC 1736972
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCA 283098
||||| ||||| ||||| || || | ||||| || || || ||||
Sbjct 1736973 CTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 1737019
>seq1
Length=4858313
Score = 158 bits (174), Expect = 3e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || || || || || || | ||| ||| || |||||||||||||| |
Sbjct 3612497 CCACCTCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAG 3612556
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || || ||||| || || || ||||| ||||| | || || ||||| ||
Sbjct 3612557 AGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGG 3612616
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|||||||||||||| |||||||| | || ||| | ||||||||||| |||| |||||
Sbjct 3612617 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCGACC 3612676
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 3612677 TCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 3612723
Score = 132 bits (146), Expect = 1e-25
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || |||||||| | || || || |||||||||||||| |
Sbjct 3612724 ACCACCTCGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 3612783
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || ||||| || || || || || ||||| | || || ||||| ||
Sbjct 3612784 CAGAGTTCGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGG 3612843
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||| || ||||| | || ||| | || || || || || | || ||
Sbjct 3612844 AATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAAC 3612903
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || |||| ||||| || || ||||||||
Sbjct 3612904 CTCGAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 3612951
Score = 132 bits (146), Expect = 1e-25
Identities = 144/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||||| || || ||||||||||| || || || || || ||
Sbjct 3613200 TCCTTCTGGATGTTGTAGTCAGAGAGGGTTCGGCCATCCTCAAGCTGCTTACCAGCGAAA 3613259
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | || || ||||| ||||| ||||||||||| |||||||| | || ||| |
Sbjct 3613260 ATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 3613319
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || || || || | || || ||||||||||| ||||| || || | ||||| |||
Sbjct 3613320 TCAATGGTATCGGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTGAGGGTCTTCACG 3613379
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 3613380 AAAATCTGCAT 3613390
Score = 116 bits (128), Expect = 8e-21
Identities = 135/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 317020 TCCTTCGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTG 317079
|||| || ||||| || || | ||| ||||| |||| || | |||||| || |||||
Sbjct 2148617 TCCTGGGTGGGGAAACCCTCGACCTGGCCGTTGGCAATGGCTCGCATCAGGGTGGACTTA 2148558
Query 317080 CCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTG 317139
|||||||| |||||||| || ||||| || || || ||| || || ||||
Sbjct 2148557 CCAGCACCGTTGGGGCCACAGAGACCGTATCGTCGGCCTCGCTTGAGTCGAAGCTGGGTT 2148498
Query 317140 TTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCG 317199
|||||| |||||||| |||| || ||||||||||||||||| | |||||| |||||
Sbjct 2148497 CGGTTCAGCAGAATCTTGGCACCGTAAGCCAGAGAGAACTCACAGTTACACAGATCCTCT 2148438
Query 317200 CC 317201
||
Sbjct 2148437 CC 2148436
Score = 100 bits (110), Expect = 6e-16
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || || || |||||||| | || || || |||||||||||||| |
Sbjct 3613391 ACCACCTCGAAGTCGGAGAACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 3613450
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || ||||| || || || ||||| || || | || || ||||| ||
Sbjct 3613451 CAGAGTTCGTCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGG 3613510
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| || ||||| | || ||| | ||||| ||||| || | |||||
Sbjct 3613511 AATTCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGAC 3613570
Score = 87.8 bits (96), Expect = 4e-12
Identities = 111/152 (73%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 315708 GAGACTCTCGCGGTCCACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTG 315767
|||| ||||| |||| | ||||||| ||||||||||||||||| | |||||| | ||
Sbjct 2149957 GAGAGTCTCGA--TCCAGATAGTTGGTAGGCTCATCAAGAACGATCAGATGGGGTCGCTG 2149900
Query 315768 CCATAGAGCGGCGCCGATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCG 315827
||| | |||| | | || ||||| | || || ||||||||||| || ||||| ||
Sbjct 2149899 CCAGGTACAGGCGGCAAGCACCAGCTTGACCTTCTGTCCACCAGACAGACCTCGGATTCG 2149840
Query 315828 AGAATGAGTGGTAAATTCTGGGTCAAGGCCAA 315859
|| |||| | || || || || || ||||
Sbjct 2149839 GGAGTGAGAGACAAGCTCGGGCTCGAGACCAA 2149808
>seq5
Length=2767003
Score = 111 bits (122), Expect = 3e-19
Identities = 566/889 (64%), Gaps = 34/889 (4%)
Strand=Plus/Plus
Query 229535 CTTCCCTATTCAATACCCCGACCTCTGGGATATGTATAAGAAGGCGGTGGCAACCTTTTG 229594
|||||| || || |||| ||| ||||| | ||||| |||||||| | ||| | || ||
Sbjct 1871865 CTTCCCCATCCAGTACCACGAGATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTG 1871924
Query 229595 GACCACGGAGGAAGTCCCCCTAAATGCA--GACGTCGTCGACTGGCGCGAGAAAC---TC 229649
|||| | ||||| | || ||| ||| | | ||||||| ||||| | ||
Sbjct 1871925 GACCGCCGAGGAGATTGATCTCG--GCAAGGACATGGGCGACTGG---GAGAACCGGCTC 1871979
Query 229650 AACGACGATGAACGCCATTTCATCAAGCACATTCTCGGGTTTTTTGCAGGTTCCGACGGT 229709
||| |||| || || |||||| |||| | || | || ||||| | |||||| |||
Sbjct 1871980 AACAACGACGAGCGGTTCTTCATCTCGCACGTGCTGGCCTTCTTTGCTGCTTCCGATGGT 1872039
Query 229710 ATCGTGATGGAAAACTTGCAGACTAACTTCAGCGTCGAAGTAACGGTCCCAGAGGCACGG 229769
|| |||| || ||| || | ||| || ||| || |||||| ||||| |
Sbjct 1872040 ATTGTGAACGAGAACCTGGTGGAGCGATTCTCCGGCGAGGTGCAGGTCCCCGAGGCCAAG 1872099
Query 229770 CAGTTTTACGCATACCAGACGTTCAATGAATCTGTTCATTCGGAACAGTATGCCCTTCTT 229829
|| |||| | ||||| | | || | || |||||| ||| | || ||
Sbjct 1872100 TGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCGGAAACGTACTCGCTGCTG 1872159
Query 229830 ATTGACGCGCTCATTTCCGACGAGCGAGAGCGTGCCGAACTGTTCGACGCCATCGAAAAC 229889
|| ||| | ||| ||| ||||| || | |||||| |||||||||| | |
Sbjct 1872160 ATCGACACATACATCAAGGACCCCAAGGAGCGAACCTACCTGTTCAACGCCATCGAGACC 1872219
Query 229890 ATCCCGGCGGTCCATAACAAAGCGCGTTGGGCTCAGAAGTGG--CTGGAAC--CCAGTAA 229945
||||| || | || || || ||||| | |||||| || || | |||
Sbjct 1872220 ATCCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATCTCCGACGACGAGTCG 1872279
Query 229946 ATCGTTTGCAGAGCGTCTCGTCGCGTGGGTGTGCGTTGAGGGTATTCTGTTCTCCGGGAG 230005
| | || || ||||| || |||| | | ||| ||||| || | ||||||||
Sbjct 1872280 ACCTTTGGC-GAGCGGCTGATCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTC 1872338
Query 230006 TTTCTGCGCCATCTTTTGGCT-ACGCAACAAGGGCGTCATGCCCGGGCTCGGTCTGTCGA 230064
||| | ||||||| ||||| | | | | ||| | |||||||||| ||| | || |
Sbjct 1872339 GTTCGCCTCCATCTTCTGGCTCAAGAAGCGAGGTC-TCATGCCCGGCCTCACCTTCTCCA 1872397
Query 230065 ACGAATTCATCAGCAGGGACGAAGGTCTTCACCAGCAATTTGGCGAGGTCTTGTATTC-- 230122
|||| ||||| | | ||||| ||||| ||| | |||| | |||| | |||
Sbjct 1872398 ACGAGCTCATCTCCCGAGACGAGGGTCTGCACACCGACTTTGCCT--GTCTGCTCTTCTC 1872455
Query 230123 GAAGCTAAATAACAAACTACCTTTCGAAACGGT------GAAACAAATCGTCACAGAAGT 230176
| | || | ||| | ||| | | | | | | | | || ||| || |
Sbjct 1872456 GCACCTCGAGAAC---CGACCCTCCAAGAAGATTGTCGAGGACGTGATTGTC---GAGGC 1872509
Query 230177 AGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAA 230236
|||| | || |||||||| | ||||||| | || ||| | || |||| |||||
Sbjct 1872510 CGTTGGTATCGAGCAGGAGTTCCTGACCGACGCTCTGCCCTGCGGACTGCTCGGAATGAA 1872569
Query 230237 TGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGG 230296
|| | |||||| | || || || || || || || || ||| | | || || || ||
Sbjct 1872570 CGCCAAGCTCATGTGCCAGTACATTGAGTTTGTCGCCGACCGTCTGCTGGTTGCTCTCGG 1872629
Query 230297 GTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCA 230356
|| || || || ||||||| |||||||||| || |||||| ||| || ||
Sbjct 1872630 CAACTCCAAGGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGC 1872689
Query 230357 GGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCA-AAGGCC 230404
|| || || ||||||||||| ||||| || ||| || || ||||||
Sbjct 1872690 CGGCAAGACCAACTTCTTCGAGAAGCGGGTGTCCGACTACCAGAAGGCC 1872738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738650134814
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