Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq2 123 2e-23
seq1 122 6e-23
>seq2
Length=4160336
Score = 123 bits (136), Expect = 2e-23
Identities = 167/231 (72%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || |||| |||| || || ||||| || ||| |||||| ||||||||||| ||
Sbjct 1736791 ATACCTCCTCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCA 1736850
Query 44168 G--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| ||||| || |||| || |||||||| ||||| || |||| |||||||| || |
Sbjct 1736851 GAAAGAGTT--CGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCG 1736908
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATT 44285
|| | || ||||| ||| ||||| ||| | | | |||||||||| || |
Sbjct 1736909 GGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACT 1736968
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCA 44336
||||||| | || || ||||| || || |||||||| || ||||||||||
Sbjct 1736969 CCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 1737019
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| |||| |||| || || || || || ||| |||||| ||||||||||| || |
Sbjct 1075049 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1074990
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| || |||| || |||||||| ||||| ||||| | |||||||| || | ||
Sbjct 1074989 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 1074930
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| || ||||| ||| ||||| ||| | | | |||||||||| || ||||||
Sbjct 1074929 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1074870
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| | || || ||||| || || |||||||| || || || |||||
Sbjct 1074869 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1074823
>seq1
Length=4858313
Score = 122 bits (134), Expect = 6e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| |||| |||| | ||| ||||| || ||| ||||| ||||||||||| |||| |
Sbjct 3612497 CCACCTCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAG 3612556
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| || |||| || |||||||| ||||| ||||| | |||||||| || | ||
Sbjct 3612557 AGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGG 3612616
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| ||| ||||| ||| ||||| ||| | | | || ||||| | || || |||
Sbjct 3612617 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCAGAAGACTCGACC 3612676
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| | || || |||||||| || |||||||||||||| || |||||
Sbjct 3612677 TCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 3612723
Score = 118 bits (130), Expect = 8e-22
Identities = 167/233 (72%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||| |||| | ||||| || || || |||||| ||||||||||| ||
Sbjct 3612721 CATACCACCTCGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 3612780
Query 44167 GG--CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
|| ||||| || |||| || |||||||| || || ||||| | |||||||| ||
Sbjct 3612781 GGACAGAGTT--CGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCC 3612838
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
| || | ||| ||||| ||| ||||| ||| | | | ||||| |||| |||
Sbjct 3612839 GGGGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGAC 3612898
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | || || |||||||| || |||||||| || ||||| |||||
Sbjct 3612899 TCAACCTCGAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 3612951
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| ||||||||||| || | ||| || | || || |||||||| || || ||
Sbjct 3613199 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCGGCCATCCTCAAGCTGCTTACCAGCGAA 3613258
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
|| | |||||||| || | || | || ||||| ||| ||||| ||| | |
Sbjct 3613259 AATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 3613318
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| ||||| |||| ||| || ||||| | || || |||||||| ||||||||||||||
Sbjct 3613319 GTCAATGGTATCGGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTGAGGGTCTTCAC 3613378
Query 44326 GAAGATTTGCAT 44337
||| || |||||
Sbjct 3613379 GAAAATCTGCAT 3613390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990220117297
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |